AGR 7.4.0 Release

What's Changed

• Update specific_tests.py by @christabone in #673

Full Changelog: 7.3.0...7.4.0

AGR 7.3.0 Release

What's Changed

• OMIM to MIM updates. by @christabone in #672

Full Changelog: 7.1.0...7.3.0

AGR 7.2.0 Release

What's Changed

• Update specific HGNC test to account for resource descriptor changes. by @christabone in #670

Full Changelog: 7.0.0...7.2.0

AGR 7.1.0 Release

What's Changed

• Update specific HGNC test to account for resource descriptor changes. by @christabone in #670

Full Changelog: 7.0.0...7.1.0

AGR 7.0.0 Release

What's Changed

• Bump urllib3 from 1.26.13 to 1.26.17 by @dependabot in #659
• Update specific_tests.py for MGI expression by @christabone in #668
• fix(requirements): using a patched version of ontobio that reads IBA annotations with new GO_REF evidence by @valearna in #669

Full Changelog: 6.0.0...7.0.0

AGR 6.0.0 Release

What's Changed

• Release 5.4.0 by @oblodgett in #648
• Bump numpy from 1.21.2 to 1.22.0 by @dependabot in #649
• Support for Neo4j 5.5.0 KANBAN-191 by @christabone in #650
• Added missing orthology index KANBAN-191 by @christabone in #651
• Possible bug fix for phenotype cacher SCRUM-2909 by @christabone in #652
• KANBAN-309 Add Paralogy data to Neo4j by @christabone in #653
• Reverted Ontology labels and added specific test. KANBAN-364 by @christabone in #654
• Adjustments to paralogy loading. KANBAN-309 by @christabone in #655
• KANBAN-309 Fixed rounding. Added tests and indices. by @christabone in #656
• Simplified the paralogy test. KANBAN-309 by @christabone in #657

Full Changelog: 5.4.0...6.0.0

AGR 5.4.0 Release

What's Changed

• Release 5.3.0 by @oblodgett in #639
• Scrum 2424 by @oblodgett in #641
• Gene desc header hotfix by @valearna in #642
• Gene desc header hotfix - using git instead of pypi to download package by @valearna in #643
• Query context manager by @oblodgett in #644
• Added code to lowercase ALL pages SCRUM-2735 by @oblodgett in #646
• Added fix for Models page by @oblodgett in #647

Full Changelog: 5.3.0...5.4.0

AGR 5.3.0 Release

What's Changed

• Removed hardcoding of release version as it needs to be passed via ENV by @oblodgett in #625
• KANBAN-173 First pass on Xenbase changes by @christabone in #624
• Modifed entries for Xenbase FASTA by @christabone in #627
• Avoid issues with duplicate transcript names across MODs by @markquintontulloch in #629
• Loader test fixes (maybe) by @markquintontulloch in #630
• SCRUM-1809 Replace CREATE queries with MERGE by @markquintontulloch in #623
• Update default_env_vars.yml by @christabone in #628
• Fixed ETL helper to allow XB genes to load properly in orthology. by @christabone in #631
• KANBAN-173 Orthology ETL fix by @christabone in #632
• Update specific_tests.py by @christabone in #634
• fix(disease_via_ortho): using undirected relationship to read ortho data for disease via ortho by @valearna in #635
• Removed chromosome relationship from GL and lines cleanup by @oblodgett in #636
• Scrum 1207 - XB gene descriptions by @valearna in #637
• Fix species name and taxon id in descriptions download files header (tsv and txt) by @valearna in #638

Full Changelog: 5.2.0...5.3.0

AGR 5.2.0 Release

What's Changed

• Release 5.1.0 into master by @oblodgett in #621
• KANBAN-143 by @christabone in #622

Full Changelog: 5.1.0...5.2.0

AGR 5.1.0 Release

What's Changed

• Bump urllib3 from 1.24.2 to 1.26.5 by @dependabot in #596
• Changes for running the loader test set in Ansible by @christabone in #598
• Release 4.1.0 into Master by @oblodgett in #610
• Change from GRCm38 to CRCm39 assembly by @markquintontulloch in #612
• SCRUM-579: ECOMAP format change + resource resolver fix by @mluypaert in #611
• Merge instead of create to avoid duplicates by @markquintontulloch in #615
• SCRUM-1001: Added experimental condition conditionId property storage by @mluypaert in #616
• SCRUM-1098 by @markquintontulloch in #617
• Bumped genedescriptions from 3.2.4 to 3.2.5 by @mluypaert in #619
• Fix filepath scope bug by @markquintontulloch in #618
• Update primary key for ZFIN experimental condition by @markquintontulloch in #620

New Contributors

• @dependabot made their first contribution in #596

Full Changelog: 4.1.0...5.1.0