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updating the generic-sequence-panal package to deal with SARS-CoV-2
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(gives a clean error now at least). Addresses https://agr-jira.atlassian.net/browse/KANBAN-520
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scottcain committed Feb 27, 2024
1 parent fe43a4b commit 5604442
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Showing 2 changed files with 4 additions and 1 deletion.
2 changes: 1 addition & 1 deletion package.json
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Expand Up @@ -27,7 +27,7 @@
"custom-event-polyfill": "^1.0.6",
"d3-selection": "2.0.0",
"document-register-element": "1.13.1",
"generic-sequence-panel": "^1.3.1",
"generic-sequence-panel": "^1.4.0",
"html-react-parser": "^0.10.0",
"immutable": "^3.8.1",
"lodash.clone": "^4.5.0",
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3 changes: 3 additions & 0 deletions src/constants.js
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Expand Up @@ -383,6 +383,9 @@ export const SPECIES = [
apolloName: 'SARS-CoV-2',
apolloTrack: '/Mature%20peptides/',
jBrowseName: 'SARS-CoV-2',
jBrowsenclistbaseurl: `https://s3.amazonaws.com/agrjbrowse/docker/3.2.0/SARS-CoV-2/`,
jBrowseurltemplate: 'tracks/All Genes/{refseq}/trackData.jsonz',
jBrowsefastaurl: 'https://s3.amazonaws.com/agrjbrowse/fasta/GCF_000001405.40_GRCh38.p14_genomic.fna.gz',
suppressFlatten: true,
vertebrate: false,
enableSingleCellExpressionAtlasLink: false,
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