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Merge pull request #1189 from alliance-genome/SCRUM-3222
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SCRUM-3222: expand help paragraph for rank
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abecerra authored Sep 14, 2023
2 parents 8817f62 + 8e77e86 commit 5f730cf
Showing 1 changed file with 10 additions and 5 deletions.
15 changes: 10 additions & 5 deletions apps/main-app/src/components/paralogy/rankHelp.js
Original file line number Diff line number Diff line change
Expand Up @@ -5,12 +5,17 @@ export default function RankHelp() {
<p>
Rank is calculated via the highest percent similarity within
four quartiles of alignment length (determined by using four 25%
quartiles derived from the longest paralog alignment length).

quartiles derived from the longest paralog alignment length).
</p>
<p>
Paralogs with the longest alignment and greatest similarity
percentage are ranked highest and DIOPT algorithm matches are
used as secondary ranking criteria in cases of equal similarity
within alignment length quartiles. Multiple entries can share the same rank.
percentage are ranked highest. Identity is used as a secondary
criteria for paralogs with identical alignment and similarity.
</p>
<p>
DIOPT algorithm matches are used as a tertiary ranking criteria
in cases of equal similarity and identity within alignment
length quartiles. Multiple entries can share the same rank.
</p>
</div>);
}

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