Fix attempt at model download into container

andreped · May 24, 2023 · d46f53d · d46f53d
1 parent 6209ec6
commit d46f53d
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Showing 2 changed files with 6 additions and 3 deletions.
diff --git a/.dockerignore b/.dockerignore
@@ -3,6 +3,8 @@ build/
 dist/
 livermask.egg-info/
 *.DS_Store
+*.h5
+*.npz
 *.nii
 *__pycache__/
 .idea/

diff --git a/Dockerfile b/Dockerfile
@@ -32,9 +32,7 @@ RUN python3.7 -m pip install --force-reinstall typing_extensions==4.0.0
 # Install wget
 RUN apt install wget -y
 
-# Download pretrained parenchyma model
-RUN wget "https://github.com/andreped/livermask/releases/download/trained-models-v1/model.h5"
-COPY --chown=user ./model.h5 /code/model.h5
+RUN ls -la
 
 # Set up a new user named "user" with user ID 1000
 RUN useradd -m -u 1000 user
@@ -52,4 +50,7 @@ WORKDIR $HOME/app
 # Copy the current directory contents into the container at $HOME/app setting the owner to the user
 COPY --chown=user . $HOME/app
 
+# Download pretrained parenchyma model
+RUN wget "https://github.com/andreped/livermask/releases/download/trained-models-v1/model.h5"
+
 CMD ["python3.7", "demo/app.py"]
-Original file line number
+Diff line change
@@ Expand Up / @@ -3,6 +3,8 @@ build/ @@
     dist/
     livermask.egg-info/
     *.DS_Store
+    *.h5
+    *.npz
     *.nii
     *__pycache__/
     .idea/
@@ Expand Down @@