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CEA4 Format Helper - Phase 1 #3753

Merged
merged 30 commits into from
Jan 13, 2025
Merged

CEA4 Format Helper - Phase 1 #3753

merged 30 commits into from
Jan 13, 2025

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ShiZhongming
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@ShiZhongming ShiZhongming commented Jan 12, 2025

This PR helps to verify the input data format's compatibility for CEA-4.
It also helps to migrate input data from CEA-3 to CEA-4.
This is Phase One of the CEA4 Format Helper.

In Phase Two, we will include the migrator for the new DB format after refactoring the DB.

Summary by CodeRabbit

Release Notes

  • New Features

    • Introduced enhanced tools for migrating and verifying data formats from CEA-3 to CEA-4.
    • Added new utility scripts to assist with data format management.
  • Configuration Updates

    • Updated emissions calculation year to 2025.
    • Added new configuration options for selecting scenarios for verification and migration.
  • Improvements

    • Enhanced data validation processes for the CEA framework.
    • Clarified documentation for the batch processing workflow.
  • Utilities

    • Added cea4-format-helper, cea4-migrate, and cea4-verify scripts for improved data management.

@ShiZhongming ShiZhongming added priority-must-have These requirements are critical and must be included in CEA feature-utilities labels Jan 12, 2025
@ShiZhongming ShiZhongming added this to the CEA4 - Mar'25 milestone Jan 12, 2025
@ShiZhongming ShiZhongming requested a review from reyery January 12, 2025 23:22
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📥 Commits

Reviewing files that changed from the base of the PR and between 8e0a209 and 966662f.

📒 Files selected for processing (3)
  • cea/datamanagement/format_helper/cea4_migrate.py (1 hunks)
  • cea/datamanagement/format_helper/cea4_verify.py (1 hunks)
  • cea/datamanagement/format_helper/format_helper.py (1 hunks)

Walkthrough

This pull request introduces a comprehensive data migration and verification system for transitioning from CEA-3 to CEA-4 format. The changes include updates to several Python scripts in the cea/datamanagement/format_helper/ directory, specifically cea4_migrate.py, cea4_verify.py, and format_helper.py. These scripts provide mechanisms to verify input data formats, migrate data between versions, and manage the overall migration process. The implementation includes detailed error checking, file path construction, and scenario processing capabilities, along with updates to the configuration file and utility scripts.

Changes

File Change Summary
cea/datamanagement/format_helper/cea4_migrate.py Added migration functions for converting CEA-3 to CEA-4 format, including path construction, file verification, and data transformation methods.
cea/datamanagement/format_helper/cea4_verify.py Implemented verification system for CEA-4 input data, with functions to check file existence, attributes, and data integrity.
cea/datamanagement/format_helper/format_helper.py Created main script to orchestrate migration and verification processes across multiple scenarios.
cea/default.config Added new [format-helper] section with migration and verification parameters, and updated existing parameters for clarity.
cea/scripts.yml Added three new utility scripts: cea4-format-helper, cea4-migrate, and cea4-verify.
cea/utilities/batch_process_workflow.py Minor documentation and error message formatting updates.

Possibly related PRs

  • data initializer to database helper #3749: The changes in this PR involve renaming data_initializer to database_helper, which is relevant as the main PR also deals with data management and migration processes, potentially affecting how data is initialized and handled during the migration from CEA-3 to CEA-4.
  • Remove worker parameters from config #3750: This PR modifies configuration parameters related to the occupancy-helper, which is relevant to the main PR's focus on data migration and verification processes, as both involve managing data formats and configurations within the CEA framework.

Suggested labels

about-interface

Poem

🐰 Hopping through data's winding maze,
Migration's path, a rabbit's praise!
From CEA-3 to version four,
Verifying each file's core.
Code hops swiftly, without a care! 🚀


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Actionable comments posted: 11

🧹 Nitpick comments (4)
cea/datamanagement/format_helper/cea4_verify.py (1)

203-205: Consider handling the case when verification passes

Currently, when all inputs are verified and compatible with CEA-4, the function cea4_verify passes without any confirmation to the user.

Consider adding a print statement to inform the user that the verification passed successfully.

         if all(not value for value in dict_missing.values()):
+            print('All inputs are already compatible with CEA-4 format. No migration needed.')
             pass
🧰 Tools
🪛 Ruff (0.8.2)

204-204: Local variable list_missing_files_shp_building_geometry is assigned to but never used

Remove assignment to unused variable list_missing_files_shp_building_geometry

(F841)


205-205: Local variable list_missing_files_csv_building_properties is assigned to but never used

Remove assignment to unused variable list_missing_files_csv_building_properties

(F841)

cea/datamanagement/format_helper/cea4_migrate.py (1)

375-375: Fix typo in docstring of main function

The word "Mirgate" is misspelled in the docstring at the top of the file.

Apply this diff to correct the typo:

-    Mirgate the format of the input data to CEA-4 format after verification.
+    Migrate the format of the input data to CEA-4 format after verification.
cea/datamanagement/format_helper/format_helper.py (1)

87-87: Adjust divider length calculation

In the main function, the div_len variable might result in negative values if the scenario name is long, causing formatting issues.

Add a condition to ensure div_len is not negative.

         div_len = 47 - len(scenario)
+        if div_len < 0:
+            div_len = 0
cea/scripts.yml (1)

368-368: Fix formatting in parameters declaration.

Add space after comma in 'general:scenario',format-helper for consistency with YAML formatting standards.

-    parameters: ['general:scenario',format-helper]
+    parameters: ['general:scenario', format-helper]
🧰 Tools
🪛 yamllint (1.35.1)

[warning] 368-368: too few spaces after comma

(commas)

📜 Review details

Configuration used: .coderabbit.yaml
Review profile: CHILL
Plan: Pro

📥 Commits

Reviewing files that changed from the base of the PR and between 611d430 and 4392dec.

📒 Files selected for processing (6)
  • cea/datamanagement/format_helper/cea4_migrate.py (1 hunks)
  • cea/datamanagement/format_helper/cea4_verify.py (1 hunks)
  • cea/datamanagement/format_helper/format_helper.py (1 hunks)
  • cea/default.config (2 hunks)
  • cea/scripts.yml (1 hunks)
  • cea/utilities/batch_process_workflow.py (3 hunks)
🧰 Additional context used
🪛 Ruff (0.8.2)
cea/datamanagement/format_helper/format_helper.py

8-8: subprocess imported but unused

Remove unused import: subprocess

(F401)


10-10: Redefinition of unused cea from line 6

Remove definition: cea

(F811)

cea/datamanagement/format_helper/cea4_verify.py

204-204: Local variable list_missing_files_shp_building_geometry is assigned to but never used

Remove assignment to unused variable list_missing_files_shp_building_geometry

(F841)


205-205: Local variable list_missing_files_csv_building_properties is assigned to but never used

Remove assignment to unused variable list_missing_files_csv_building_properties

(F841)


228-228: Local variable scenario_name is assigned to but never used

Remove assignment to unused variable scenario_name

(F841)

cea/datamanagement/format_helper/cea4_migrate.py

12-12: sys imported but unused

Remove unused import: sys

(F401)


24-24: cea.datamanagement.format_helper.cea4_verify.CSV_BUILDING_PROPERTIES_4 imported but unused

Remove unused import: cea.datamanagement.format_helper.cea4_verify.CSV_BUILDING_PROPERTIES_4

(F401)

🪛 GitHub Actions: Ruff
cea/datamanagement/format_helper/format_helper.py

[error] 8-8: Unused import: subprocess is imported but never used


[error] 10-10: Redefinition of unused cea from line 6

cea/datamanagement/format_helper/cea4_migrate.py

[error] 12-12: Unused import: sys is imported but never used


[error] 24-24: Unused import: CSV_BUILDING_PROPERTIES_4 is imported but never used

🪛 yamllint (1.35.1)
cea/scripts.yml

[warning] 368-368: too few spaces after comma

(commas)

⏰ Context from checks skipped due to timeout of 90000ms (3)
  • GitHub Check: windows-latest
  • GitHub Check: macos-latest
  • GitHub Check: ubuntu-latest
🔇 Additional comments (8)
cea/datamanagement/format_helper/cea4_verify.py (1)

Line range hint 406-408: Correct time formatting in print statement

The time elapsed is being formatted incorrectly in the print statement. The %d.2 format specifier is not appropriate for floating-point numbers.

Apply this diff to correct the format specifier:

-        print('The entire process of CEA-4 format verification is now completed - time elapsed: %d.2 seconds' % time_elapsed)
+        print('The entire process of CEA-4 format verification is now completed - time elapsed: %.2f seconds' % time_elapsed)

Ensure that the time is displayed correctly with two decimal places.

✅ Verification successful

Incorrect format specifier confirmed

The review comment is correct. The code uses time.perf_counter() which returns a floating-point number, but attempts to format it with %d.2 which incorrectly tries to format it as an integer. The suggested fix to use %.2f is the correct solution.

🏁 Scripts executed

The following scripts were executed for the analysis:

Error: No shell scripts found


Script:

#!/bin/bash
# Check if file exists and show relevant lines
if [ -f "cea/datamanagement/format_helper/cea4_verify.py" ]; then
    echo "File exists. Showing content:"
    # Show lines around 406-408 with context
    rg -A 2 -B 2 "time_elapsed.*seconds" "cea/datamanagement/format_helper/cea4_verify.py"
    
    # Look for time_elapsed variable usage
    echo -e "\nSearching for time_elapsed variable:"
    rg "time_elapsed" "cea/datamanagement/format_helper/cea4_verify.py"
else
    echo "File not found"
fi

Length of output: 537

🧰 Tools
🪛 Ruff (0.8.2)

204-204: Local variable list_missing_files_shp_building_geometry is assigned to but never used

Remove assignment to unused variable list_missing_files_shp_building_geometry

(F841)


205-205: Local variable list_missing_files_csv_building_properties is assigned to but never used

Remove assignment to unused variable list_missing_files_csv_building_properties

(F841)


228-228: Local variable scenario_name is assigned to but never used

Remove assignment to unused variable scenario_name

(F841)

cea/datamanagement/format_helper/cea4_migrate.py (1)

407-409: ⚠️ Potential issue

Correct time formatting in print statement

The time elapsed is being formatted incorrectly in the print statement. The %d.2 format specifier is not appropriate for floating-point numbers.

Apply this diff to correct the format specifier:

-        print('The entire process of data migration from CEA-3 to CEA-4 is now completed - time elapsed: %d.2 seconds' % time_elapsed)
+        print('The entire process of data migration from CEA-3 to CEA-4 is now completed - time elapsed: %.2f seconds' % time_elapsed)

Ensure that the time is displayed correctly with two decimal places.

✅ Verification successful

String formatting fix is correct

The suggested fix to use %.2f instead of %d.2 is the correct solution. The current format specifier is syntactically incorrect, while the proposed one will properly format the floating-point time value with two decimal places.

🏁 Scripts executed

The following scripts were executed for the analysis:

Error: No shell scripts found

cea/utilities/batch_process_workflow.py (2)

159-159: LGTM! Improved docstring clarity.

The docstring now correctly specifies that the function processes "selected scenarios" rather than "all scenarios", which better reflects its actual behavior.


187-187: LGTM! Improved error message formatting.

Added period at the end of the error message for better consistency in message formatting.

cea/scripts.yml (1)

360-387: LGTM! Well-structured CEA-4 format helper utilities.

The new utilities are well-organized and provide a comprehensive solution for CEA-4 format handling:

  • cea4-format-helper: Combined verification and migration capabilities
  • cea4-migrate: Dedicated migration functionality
  • cea4-verify: Standalone verification tool

Each utility has clear descriptions and appropriate interface configurations.

🧰 Tools
🪛 yamllint (1.35.1)

[warning] 368-368: too few spaces after comma

(commas)

cea/default.config (3)

363-365: LGTM! Updated emissions calculation year.

Updated year-to-calculate to 2025 and improved the help text to better explain its purpose in emissions calculations.


613-620: LGTM! Well-designed format helper configuration.

The new format-helper section provides essential parameters for CEA-4 format handling:

  • scenarios-to-verify-and-migrate: Flexible scenario selection
  • migrate-from-cea-3: Clear control over migration process with appropriate warning about irreversibility

625-625: LGTM! Improved help text clarity.

Updated help text for scenarios-to-simulate to clarify the exclusion of reference scenario when importing from Rhino/Grasshopper.

cea/datamanagement/format_helper/cea4_verify.py Outdated Show resolved Hide resolved
cea/datamanagement/format_helper/cea4_verify.py Outdated Show resolved Hide resolved
cea/datamanagement/format_helper/cea4_verify.py Outdated Show resolved Hide resolved
cea/datamanagement/format_helper/cea4_migrate.py Outdated Show resolved Hide resolved
cea/datamanagement/format_helper/cea4_migrate.py Outdated Show resolved Hide resolved
cea/datamanagement/format_helper/format_helper.py Outdated Show resolved Hide resolved
t0 = time.perf_counter()

assert os.path.exists(config.general.project), 'input file not found: %s' % config.project

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⚠️ Potential issue

Fix assertion error message

The assertion message uses config.project, but it should reference config.general.project.

Apply this diff to correct the variable reference:

-        assert os.path.exists(config.general.project), 'input file not found: %s' % config.project
+        assert os.path.exists(config.general.project), 'input file not found: %s' % config.general.project

Committable suggestion skipped: line range outside the PR's diff.

cea/datamanagement/format_helper/format_helper.py Outdated Show resolved Hide resolved
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Actionable comments posted: 4

🧹 Nitpick comments (6)
cea/datamanagement/format_helper/format_helper.py (3)

2-2: Fix typo in docstring

The word "formate" in the docstring should be "format".

-Main script of the formate helper that activates the verification and migration as needed.
+Main script of the format helper that activates the verification and migration as needed.

31-32: Consider using os.pathsep for cross-platform compatibility

Using : as a path separator is Unix-specific. For better cross-platform compatibility, use os.pathsep.

-my_env['PATH'] = f"{os.path.dirname(sys.executable)}:{my_env['PATH']}"
+my_env['PATH'] = f"{os.path.dirname(sys.executable)}{os.pathsep}{my_env['PATH']}"

39-41: Remove commented-out subprocess calls

The code contains commented-out subprocess calls that should be removed if they're no longer needed.

    if not bool_migrate:
-        # subprocess.run(['cea', 'cea4_migrate', '--scenario', cea_scenario], env=my_env, check=True,capture_output=True)
        dict_missing = cea4_verify(cea_scenario, print_results=True)
        print_verification_results_4(scenario_name, dict_missing)

    else:
-        # subprocess.run(['cea', 'cea4_verify', '--scenario', cea_scenario], env=my_env, check=True, capture_output=True)
        migrate_cea3_to_cea4(cea_scenario)

Also applies to: 44-46

cea/datamanagement/format_helper/cea4_verify.py (1)

47-48: Document the limitation of hardcoded paths

The comment about hardcoded paths should be expanded to explain the limitation and future plans.

Add a TODO comment to track the technical debt:

 # The paths are relatively hardcoded for now without using the inputlocator script.
 # This is because we want to iterate over all scenarios, which is currently not possible with the inputlocator script.
+# TODO: Refactor to use inputlocator once it supports scenario iteration
cea/datamanagement/format_helper/cea4_migrate.py (2)

2-2: Fix typo in docstring

The word "Mirgate" in the docstring should be "Migrate".

-Mirgate the format of the input data to CEA-4 format after verification.
+Migrate the format of the input data to CEA-4 format after verification.

279-279: Fix typo in comment

The comment contains typos: "folde" and "mirgrated".

-        #2. about the .dbf files in the building-properties folde to be mirgrated to .csv files
+        #2. about the .dbf files in the building-properties folder to be migrated to .csv files
📜 Review details

Configuration used: .coderabbit.yaml
Review profile: CHILL
Plan: Pro

📥 Commits

Reviewing files that changed from the base of the PR and between 4392dec and c6d2623.

📒 Files selected for processing (3)
  • cea/datamanagement/format_helper/cea4_migrate.py (1 hunks)
  • cea/datamanagement/format_helper/cea4_verify.py (1 hunks)
  • cea/datamanagement/format_helper/format_helper.py (1 hunks)
🧰 Additional context used
🪛 Ruff (0.8.2)
cea/datamanagement/format_helper/cea4_verify.py

203-203: Local variable list_missing_files_shp_building_geometry is assigned to but never used

Remove assignment to unused variable list_missing_files_shp_building_geometry

(F841)


204-204: Local variable list_missing_files_csv_building_properties is assigned to but never used

Remove assignment to unused variable list_missing_files_csv_building_properties

(F841)


227-227: Local variable scenario_name is assigned to but never used

Remove assignment to unused variable scenario_name

(F841)

cea/datamanagement/format_helper/format_helper.py

9-9: Redefinition of unused cea from line 6

Remove definition: cea

(F811)

🪛 GitHub Actions: Ruff
cea/datamanagement/format_helper/format_helper.py

[error] 9-9: Redefinition of unused cea from line 6. Remove definition: cea

⏰ Context from checks skipped due to timeout of 90000ms (3)
  • GitHub Check: windows-latest
  • GitHub Check: macos-latest
  • GitHub Check: ubuntu-latest
🔇 Additional comments (7)
cea/datamanagement/format_helper/format_helper.py (3)

6-10: ⚠️ Potential issue

Remove duplicate import

The module cea.config is imported twice.

 import cea.config
 import os
 import sys
-import cea.config
 import time

Likely invalid or redundant comment.

🧰 Tools
🪛 Ruff (0.8.2)

9-9: Redefinition of unused cea from line 6

Remove definition: cea

(F811)

🪛 GitHub Actions: Ruff

[error] 9-9: Redefinition of unused cea from line 6. Remove definition: cea


94-94: ⚠️ Potential issue

Fix time formatting pattern

The time formatting pattern %d.2 is incorrect for floating-point numbers. Use %.2f instead.

-    print('The entire batch processing of data format verification (and migration) for CEA-4 is now completed - time elapsed: %d.2 seconds' % time_elapsed)
+    print('The entire batch processing of data format verification (and migration) for CEA-4 is now completed - time elapsed: %.2f seconds' % time_elapsed)

Likely invalid or redundant comment.


68-68: ⚠️ Potential issue

Fix incorrect variable reference in assertion message

The assertion message references config.project, but it should be config.general.project.

-    assert os.path.exists(config.general.project), 'input file not found: %s' % config.project
+    assert os.path.exists(config.general.project), 'input file not found: %s' % config.general.project

Likely invalid or redundant comment.

cea/datamanagement/format_helper/cea4_verify.py (3)

203-204: ⚠️ Potential issue

Remove unused variables

The variables list_missing_files_shp_building_geometry and list_missing_files_csv_building_properties are assigned but never used.

-    list_missing_files_shp_building_geometry = dict_missing.get('building-geometry')
-    list_missing_files_csv_building_properties = dict_missing.get('building-properties')

Likely invalid or redundant comment.

🧰 Tools
🪛 Ruff (0.8.2)

203-203: Local variable list_missing_files_shp_building_geometry is assigned to but never used

Remove assignment to unused variable list_missing_files_shp_building_geometry

(F841)


204-204: Local variable list_missing_files_csv_building_properties is assigned to but never used

Remove assignment to unused variable list_missing_files_csv_building_properties

(F841)


195-197: ⚠️ Potential issue

Add error handling for the 'name' column access

The function assumes the 'name' column exists without checking, which could raise a KeyError.

-    list_names_duplicated = df['name'][df['name'].duplicated()].tolist()
+    if 'name' in df.columns:
+        name_column = 'name'
+    elif 'Name' in df.columns:
+        name_column = 'Name'
+    else:
+        raise ValueError("The file does not contain a 'name' column.")
+    list_names_duplicated = df[name_column][df[name_column].duplicated()].tolist()

Likely invalid or redundant comment.


227-227: ⚠️ Potential issue

Remove unused variable scenario_name

The variable scenario_name is assigned but never used.

-    scenario_name = os.path.basename(scenario)

Likely invalid or redundant comment.

🧰 Tools
🪛 Ruff (0.8.2)

227-227: Local variable scenario_name is assigned to but never used

Remove assignment to unused variable scenario_name

(F841)

cea/datamanagement/format_helper/cea4_migrate.py (1)

154-154: ⚠️ Potential issue

Fix incorrect error message

The error message mentions CSV file when it's actually a DBF file.

-        raise ValueError(f"Error reading CSV file: {e}")
+        raise ValueError(f"Error reading DBF file: {e}")

Likely invalid or redundant comment.

cea/datamanagement/format_helper/cea4_verify.py Outdated Show resolved Hide resolved
cea/datamanagement/format_helper/cea4_migrate.py Outdated Show resolved Hide resolved
cea/datamanagement/format_helper/cea4_migrate.py Outdated Show resolved Hide resolved
cea/datamanagement/format_helper/cea4_migrate.py Outdated Show resolved Hide resolved
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Actionable comments posted: 4

🧹 Nitpick comments (5)
cea/datamanagement/format_helper/format_helper.py (2)

2-2: Fix typo in docstring

The word "formate" in the docstring is misspelled.

-Main script of the formate helper that activates the verification and migration as needed.
+Main script of the format helper that activates the verification and migration as needed.

40-41: Remove commented-out code

The commented-out subprocess commands should be removed as they are no longer needed and can cause confusion.

-        # subprocess.run(['cea', 'cea4_migrate', '--scenario', cea_scenario], env=my_env, check=True,capture_output=True)
         dict_missing = cea4_verify(cea_scenario, print_results=True)
         print_verification_results_4(scenario_name, dict_missing)

         else:
-        # subprocess.run(['cea', 'cea4_verify', '--scenario', cea_scenario], env=my_env, check=True, capture_output=True)
         migrate_cea3_to_cea4(cea_scenario)

Also applies to: 45-46

cea/datamanagement/format_helper/cea4_migrate.py (2)

2-2: Fix typo in docstring

The word "Mirgate" in the docstring is misspelled.

-Mirgate the format of the input data to CEA-4 format after verification.
+Migrate the format of the input data to CEA-4 format after verification.

62-64: Consider using inputlocator script

The comment indicates that paths are hardcoded due to iteration requirements. Consider implementing a solution that allows iteration while using the inputlocator script for better maintainability.

Consider creating an iterator class that works with the inputlocator script to handle multiple scenarios while maintaining the benefits of centralized path management.

cea/datamanagement/format_helper/cea4_verify.py (1)

334-336: TODO comment about database verification

The comment about verifying the database under "inputs/technology/" folder is not implemented.

Would you like me to help implement the database verification logic or create a GitHub issue to track this task?

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🔇 Additional comments (3)
cea/datamanagement/format_helper/format_helper.py (2)

6-12: ⚠️ Potential issue

Clean up imports

There are duplicate imports and unused imports that should be removed.

 import cea.config
 import os
 import sys
-import cea.config
 import time
 from cea.datamanagement.format_helper.cea4_verify import cea4_verify, print_verification_results_4
 from cea.datamanagement.format_helper.cea4_migrate import migrate_cea3_to_cea4

Likely invalid or redundant comment.

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🪛 Ruff (0.8.2)

9-9: Redefinition of unused cea from line 6

Remove definition: cea

(F811)

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[error] 9-9: Redefinition of unused cea from line 6. Remove definition: cea


68-69: ⚠️ Potential issue

Fix incorrect config reference in assertion message

The error message references config.project but should use config.general.project.

-    assert os.path.exists(config.general.project), 'input file not found: %s' % config.project
+    assert os.path.exists(config.general.project), 'input file not found: %s' % config.general.project

Likely invalid or redundant comment.

cea/datamanagement/format_helper/cea4_verify.py (1)

168-199: ⚠️ Potential issue

Fix 'name' column assumption in verify_name_duplicates_4

The function assumes the existence of a 'name' column without checking, which could lead to KeyError.

-    # Find duplicate names
-    list_names_duplicated = df['name'][df['name'].duplicated()].tolist()
+    # Find duplicate names (case-insensitive check for both 'name' and 'Name')
+    name_col = None
+    for col in df.columns:
+        if col.lower() == 'name':
+            name_col = col
+            break
+    
+    if name_col is None:
+        raise ValueError("The file does not contain a 'name' column")
+        
+    list_names_duplicated = df[name_col][df[name_col].duplicated()].tolist()

Likely invalid or redundant comment.

cea/datamanagement/format_helper/cea4_migrate.py Outdated Show resolved Hide resolved
cea/datamanagement/format_helper/cea4_migrate.py Outdated Show resolved Hide resolved
cea/datamanagement/format_helper/cea4_verify.py Outdated Show resolved Hide resolved
@ShiZhongming ShiZhongming changed the title CEA4 Format Helper CEA4 Format Helper - Phase 1 Jan 13, 2025
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Actionable comments posted: 1

♻️ Duplicate comments (2)
cea/datamanagement/format_helper/cea4_verify.py (2)

196-196: ⚠️ Potential issue

Fix the 'name' column assumption

The function directly accesses the 'name' column without verifying its existence, which could raise a KeyError.

Apply this fix:

-    list_names_duplicated = df['name'][df['name'].duplicated()].tolist()
+    if 'name' in df.columns:
+        name_column = 'name'
+    elif 'Name' in df.columns:
+        name_column = 'Name'
+    else:
+        raise ValueError("The file does not contain a 'name' column.")
+    list_names_duplicated = df[name_column][df[name_column].duplicated()].tolist()

374-374: ⚠️ Potential issue

Fix time formatting pattern

The time formatting pattern %.2f should be used for floating-point numbers.

-    print('The entire process of CEA-4 format verification is now completed - time elapsed: %.2f seconds' % time_elapsed)
+    print('The entire process of CEA-4 format verification is now completed - time elapsed: %.2f seconds' % time_elapsed)
🧹 Nitpick comments (9)
cea/datamanagement/format_helper/cea4_verify.py (2)

14-14: Update the copyright year

The copyright year is set to 2025, which is beyond the current date. Update it to reflect the current year.

-__copyright__ = "Copyright 2025, Architecture and Building Systems - ETH Zurich"
+__copyright__ = "Copyright 2024, Architecture and Building Systems - ETH Zurich"

1-377: Overall solid implementation with room for improvement

The verification system is well-structured with comprehensive checks. Consider:

  • Adding logging instead of print statements for better error tracking
  • Adding type hints to improve code maintainability
  • Adding more detailed error messages to help users fix issues
cea/datamanagement/format_helper/cea4_migrate.py (7)

2-2: Fix typo in docstring

"Mirgate" should be "Migrate".

-Mirgate the format of the input data to CEA-4 format after verification.
+Migrate the format of the input data to CEA-4 format after verification.

16-16: Update copyright year

The copyright year 2025 is set in the future. Consider updating it to the current year.

-__copyright__ = "Copyright 2025, Architecture and Building Systems - ETH Zurich"
+__copyright__ = "Copyright 2024, Architecture and Building Systems - ETH Zurich"

62-92: Consider using a configuration file for paths

The paths are currently hardcoded. Consider moving them to a configuration file for better maintainability and flexibility.


170-171: Update incorrect parameter descriptions in docstring

The docstring parameters don't match the actual function parameters.

-    :param shapefile_path: Path to the shapefile (without file extension).
-    :param new_dataframe: pandas DataFrame with the new data to replace the DBF file.
+    :param scenario: Path or identifier for the scenario.
+    :param item: Identifier for the shapefile.
+    :param new_dataframe: pandas DataFrame with the new data to replace the DBF file.
+    :param list_attributes_3: List of attributes in CEA-3 format.

237-242: Remove commented-out code

Clean up the code by removing commented-out print statements or convert them to proper debug logging.

Consider using Python's logging module for debug messages instead of commented-out print statements.


341-341: Improve assertion error message

The error message could be more descriptive by including the actual path.

-    assert os.path.exists(config.general.project), 'input file not found: %s' % config.project
+    assert os.path.exists(config.general.project), f'Project directory not found at: {config.general.project}'

1-369: Overall: Well-structured migration script with minor improvements needed

The code is well-organized with clear separation of concerns, comprehensive migration logic, and good error handling. Consider the following improvements:

  1. Add error handling for file operations
  2. Clean up commented-out code
  3. Move hardcoded paths to configuration
  4. Fix documentation and error messages
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🔇 Additional comments (4)
cea/datamanagement/format_helper/cea4_verify.py (1)

49-74: LGTM! Well-structured path construction

The function is well-implemented with:

  • Clear error handling for unknown items
  • Comprehensive coverage of all file types
  • Documented reasoning for hardcoded paths
cea/datamanagement/format_helper/cea4_migrate.py (3)

28-56: LGTM! Well-organized constants and mappings

The constants and column mappings are well-defined, following consistent naming conventions.


151-154: ⚠️ Potential issue

Fix incorrect error message

The error message refers to a CSV file when reading a DBF file.

     try:
         df = dbf_to_dataframe(dbf_path)
     except Exception as e:
-        raise ValueError(f"Error reading CSV file: {e}")
+        raise ValueError(f"Error reading DBF file: {e}")

Likely invalid or redundant comment.


322-324: 🛠️ Refactor suggestion

Add error handling for file operations

The file removal operation lacks proper error handling.

     if os.path.exists(typology_path):
-        os.remove(typology_path)
-        print('typology.dbf has been removed as it is no longer needed by CEA-4.')
+        try:
+            os.remove(typology_path)
+            print('typology.dbf has been removed as it is no longer needed by CEA-4.')
+        except OSError as e:
+            print(f'Error removing typology.dbf: {e}')

Likely invalid or redundant comment.

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Actionable comments posted: 5

🧹 Nitpick comments (7)
cea/datamanagement/format_helper/cea4_verify.py (5)

2-2: Fix typo in docstring

There's a typo in the docstring: "Verify" is misspelled.

-Verify the format of the input data for CEA-4 model.
+Verify the format of the input data for the CEA-4 model.

14-14: Update copyright year

The copyright year is set to 2025, which is beyond the current date (January 2025).

-__copyright__ = "Copyright 2025, Architecture and Building Systems - ETH Zurich"
+__copyright__ = "Copyright 2024-2025, Architecture and Building Systems - ETH Zurich"

47-49: Move comment to function docstring and add type hints

The comment about hardcoding should be part of the function's docstring, and the function would benefit from type hints.

 def path_to_input_file_without_db_4(scenario, item):
+    """
+    Construct the path to an input file without using the inputlocator script.
+    
+    Note: The paths are relatively hardcoded for now because we want to iterate over
+    all scenarios, which is currently not possible with the inputlocator script.
+    
+    Args:
+        scenario (str): The scenario path
+        item (str): The item type (e.g., 'zone', 'surroundings', etc.)
+    
+    Returns:
+        str: The constructed file path
+        
+    Raises:
+        ValueError: If the item type is unknown
+    """

Line range hint 407-407: Remove commented-out code

Remove the commented-out print statement as it's no longer needed.

-    # print("-" * 1 + ' Scenario: {scenario} - end '.format(scenario=scenario_name) + "-" * 50)

Line range hint 384-388: Add error handling for configuration

The configuration validation could be more robust.

 def main(config):
     # Start the timer
     t0 = time.perf_counter()
-    assert os.path.exists(config.general.project), 'input file not found: %s' % config.project
+    if not hasattr(config, 'general') or not hasattr(config.general, 'project'):
+        raise ValueError("Invalid configuration: 'general.project' not found")
+    if not os.path.exists(config.general.project):
+        raise FileNotFoundError(f'Project file not found: {config.project}')
cea/datamanagement/format_helper/cea4_migrate.py (2)

2-2: Fix typo in docstring

There's a typo in the docstring: "Mirgate" should be "Migrate".

-Mirgate the format of the input data to CEA-4 format after verification.
+Migrate the format of the input data to CEA-4 format after verification.

384-415: Improve progress reporting and clean up commented code

The main function could benefit from better progress reporting and cleanup.

  1. Add a progress reporting mechanism:
def report_progress(stage, total_stages):
    """Report progress of the migration process."""
    print(f"[{stage}/{total_stages}] {stage_descriptions[stage]}")

stage_descriptions = {
}
  1. Remove commented-out code and use the progress reporting:
-    # Print: End
-    # print("-" * 1 + ' Scenario: {scenario} - end '.format(scenario=scenario_name) + "-" * 50)
     print('+' * 60)
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  • cea/datamanagement/format_helper/cea4_verify.py (1 hunks)
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cea/datamanagement/format_helper/cea4_verify.py (1)

195-197: ⚠️ Potential issue

Fix name column case sensitivity

The function assumes the 'name' column exists and is lowercase, but it should handle both 'name' and 'Name' cases.

-    list_names_duplicated = df['name'][df['name'].duplicated()].tolist()
+    name_col = 'name' if 'name' in df.columns else 'Name'
+    if name_col not in df.columns:
+        raise ValueError("Neither 'name' nor 'Name' column found in the file")
+    list_names_duplicated = df[name_col][df[name_col].duplicated()].tolist()

Likely invalid or redundant comment.

cea/datamanagement/format_helper/cea4_verify.py Outdated Show resolved Hide resolved
Comment on lines +235 to +236
if 'name' not in list_missing_columns:
list_names_duplicated = verify_name_duplicates_4(scenario, item)
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⚠️ Potential issue

Fix incorrect logic in name column check

The condition is checking the wrong list for the 'name' column presence.

-    if 'name' not in list_missing_columns:
+    if 'name' in required_columns:  # Only check for duplicates if name is a required column
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Carefully review the code before committing. Ensure that it accurately replaces the highlighted code, contains no missing lines, and has no issues with indentation. Thoroughly test & benchmark the code to ensure it meets the requirements.

Suggested change
if 'name' not in list_missing_columns:
list_names_duplicated = verify_name_duplicates_4(scenario, item)
if 'name' in required_columns: # Only check for duplicates if name is a required column
list_names_duplicated = verify_name_duplicates_4(scenario, item)

Comment on lines +147 to +154
if not os.path.isfile(dbf_path):
raise FileNotFoundError(f"CSV file not found: {dbf_path}")

# Load the CSV file
try:
df = dbf_to_dataframe(dbf_path)
except Exception as e:
raise ValueError(f"Error reading CSV file: {e}")
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⚠️ Potential issue

Fix incorrect error messages in verify_dbf_3

The error messages refer to CSV files when handling DBF files.

     if not os.path.isfile(dbf_path):
-        raise FileNotFoundError(f"CSV file not found: {dbf_path}")
+        raise FileNotFoundError(f"DBF file not found: {dbf_path}")
 
     try:
         df = dbf_to_dataframe(dbf_path)
     except Exception as e:
-        raise ValueError(f"Error reading CSV file: {e}")
+        raise ValueError(f"Error reading DBF file: {e}")
📝 Committable suggestion

‼️ IMPORTANT
Carefully review the code before committing. Ensure that it accurately replaces the highlighted code, contains no missing lines, and has no issues with indentation. Thoroughly test & benchmark the code to ensure it meets the requirements.

Suggested change
if not os.path.isfile(dbf_path):
raise FileNotFoundError(f"CSV file not found: {dbf_path}")
# Load the CSV file
try:
df = dbf_to_dataframe(dbf_path)
except Exception as e:
raise ValueError(f"Error reading CSV file: {e}")
if not os.path.isfile(dbf_path):
raise FileNotFoundError(f"DBF file not found: {dbf_path}")
# Load the CSV file
try:
df = dbf_to_dataframe(dbf_path)
except Exception as e:
raise ValueError(f"Error reading DBF file: {e}")

Comment on lines +272 to +273
zone_df_4 = pd.merge(zone_df_3, typology_df, left_on=['name'], right_on=["Name"], how='left')
zone_df_4.drop(columns=['Name'], inplace=True)
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⚠️ Potential issue

Add error handling for DataFrame merge operation

The merge operation could fail silently if the key columns don't match.

-                        zone_df_4 = pd.merge(zone_df_3, typology_df, left_on=['name'], right_on=["Name"], how='left')
-                        zone_df_4.drop(columns=['Name'], inplace=True)
+                        try:
+                            zone_df_4 = pd.merge(zone_df_3, typology_df, left_on=['name'], right_on=["Name"], how='left')
+                            if zone_df_4['name'].isna().any():
+                                raise ValueError("Some buildings in zone.shp don't have matching records in typology.dbf")
+                            zone_df_4.drop(columns=['Name'], inplace=True)
+                        except Exception as e:
+                            raise ValueError(f"Error merging zone and typology data: {e}")
📝 Committable suggestion

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Carefully review the code before committing. Ensure that it accurately replaces the highlighted code, contains no missing lines, and has no issues with indentation. Thoroughly test & benchmark the code to ensure it meets the requirements.

Suggested change
zone_df_4 = pd.merge(zone_df_3, typology_df, left_on=['name'], right_on=["Name"], how='left')
zone_df_4.drop(columns=['Name'], inplace=True)
try:
zone_df_4 = pd.merge(zone_df_3, typology_df, left_on=['name'], right_on=["Name"], how='left')
if zone_df_4['name'].isna().any():
raise ValueError("Some buildings in zone.shp don't have matching records in typology.dbf")
zone_df_4.drop(columns=['Name'], inplace=True)
except Exception as e:
raise ValueError(f"Error merging zone and typology data: {e}")

Comment on lines +223 to +224
df.to_csv(path_to_input_file_without_db_4(scenario, item), index=False)
os.remove(path_to_input_file_without_db_3(scenario, item))
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🛠️ Refactor suggestion

Add error handling for file operations

The file operations lack proper error handling.

-                df.to_csv(path_to_input_file_without_db_4(scenario, item), index=False)
-                os.remove(path_to_input_file_without_db_3(scenario, item))
+                output_path = path_to_input_file_without_db_4(scenario, item)
+                input_path = path_to_input_file_without_db_3(scenario, item)
+                try:
+                    df.to_csv(output_path, index=False)
+                    if os.path.exists(input_path):
+                        os.remove(input_path)
+                except (IOError, OSError) as e:
+                    raise RuntimeError(f"Error during file operations: {e}")
📝 Committable suggestion

‼️ IMPORTANT
Carefully review the code before committing. Ensure that it accurately replaces the highlighted code, contains no missing lines, and has no issues with indentation. Thoroughly test & benchmark the code to ensure it meets the requirements.

Suggested change
df.to_csv(path_to_input_file_without_db_4(scenario, item), index=False)
os.remove(path_to_input_file_without_db_3(scenario, item))
output_path = path_to_input_file_without_db_4(scenario, item)
input_path = path_to_input_file_without_db_3(scenario, item)
try:
df.to_csv(output_path, index=False)
if os.path.exists(input_path):
os.remove(input_path)
except (IOError, OSError) as e:
raise RuntimeError(f"Error during file operations: {e}")

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Actionable comments posted: 1

🧹 Nitpick comments (3)
cea/datamanagement/format_helper/format_helper.py (3)

1-4: Fix typo in module docstring

There's a typo in the word "formate" which should be "format".

-Main script of the formate helper that activates the verification and migration as needed.
+Main script of the format helper that activates the verification and migration as needed.

29-29: Remove commented-out code

Remove the commented-out subprocess calls if they are no longer needed. If they are meant for future use, add a TODO comment explaining why they are kept.

-        # subprocess.run(['cea', 'cea4_migrate', '--scenario', cea_scenario], env=my_env, check=True,capture_output=True)
-        # subprocess.run(['cea', 'cea4_verify', '--scenario', cea_scenario], env=my_env, check=True, capture_output=True)

Also applies to: 34-34


44-51: Add type hints to improve code maintainability

Consider adding type hints to improve code maintainability and IDE support.

-def main(config):
+def main(config: cea.config.Configuration) -> None:
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cea/datamanagement/format_helper/format_helper.py

7-7: sys imported but unused

Remove unused import: sys

(F401)

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[error] 7-7: Unused import: sys is imported but never used in the code

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cea/datamanagement/format_helper/format_helper.py (3)

86-87: LGTM!

The entry point implementation follows Python best practices.


14-14: ⚠️ Potential issue

Update copyright year

The copyright year is set to 2025, which is a future date. Please update it to the current year.

-__copyright__ = "Copyright 2025, Architecture and Building Systems - ETH Zurich"
+__copyright__ = "Copyright 2024, Architecture and Building Systems - ETH Zurich"

Likely invalid or redundant comment.


23-38: 🛠️ Refactor suggestion

Improve error handling and logic flow

  1. The function lacks error handling for potential exceptions
  2. The logic flow seems inverted - migration should happen before verification

Consider this improved implementation:

 def exec_cea_format_helper(config, cea_scenario):
     # auto-migrate from CEA-3 to CEA-4
     bool_migrate = config.format_helper.migrate_from_cea_3
     scenario_name = os.path.basename(cea_scenario)
 
     try:
         if bool_migrate:
             migrate_cea3_to_cea4(cea_scenario)
             print(f"Successfully migrated {scenario_name} from CEA-3 to CEA-4")
 
         dict_missing = cea4_verify(cea_scenario, print_results=not bool_migrate)
         print_verification_results_4(scenario_name, dict_missing)
     except Exception as e:
         print(f"Error processing scenario {scenario_name}: {str(e)}")
         raise

Likely invalid or redundant comment.

cea/datamanagement/format_helper/format_helper.py Outdated Show resolved Hide resolved
@ShiZhongming ShiZhongming merged commit 40be1d3 into release-4.0 Jan 13, 2025
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@ShiZhongming ShiZhongming deleted the cea4-format-helper branch January 13, 2025 15:54
@coderabbitai coderabbitai bot mentioned this pull request Jan 30, 2025
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