AxonDeepSeg
Segmentation software for microscopy data of nerve fibers based on deep learning.
Pinned Loading
Repositories
Showing 10 of 29 repositories
- model_seg_unmyelinated_tem Public
Model for unmyelinated axon segmentation in TEM images, based on nnUNet
axondeepseg/model_seg_unmyelinated_tem’s past year of commit activity - model-seg-human-brain-cars Public
Axon and myelin segmentation model in histology images to quantify myelination in the human brain. Training data was acquired in the uncinate fasciculus using CARS microscopy.
axondeepseg/model-seg-human-brain-cars’s past year of commit activity - AxonDeepSynth Public Forked from icon-lab/SynDiff
AxonDeepSynth is a framework leveraging the SynDiff model for unsupervised image translation, designed to enhance segmentation model performance across different imaging modalities in out-of-distribution (OOD) scenarios. Link to the paper is: https://www.arxiv.org/abs/2412.02858
axondeepseg/AxonDeepSynth’s past year of commit activity - model_seg_generalist Public
Axon and myelin segmentation model trained on all ADS datasets. Works across contrasts and resolutions.
axondeepseg/model_seg_generalist’s past year of commit activity
