Update bactopia-to-md.py

bactopia · Sep 22, 2024 · f076f47 · f076f47
1 parent 7c520e5
commit f076f47
Showing 1 changed file with 2 additions and 2 deletions.
diff --git a/bin/bactopia-to-md.py b/bin/bactopia-to-md.py
@@ -122,8 +122,8 @@ def read_nextflow_config(nf_config):
     """   """
     config = {}
     with open(nf_config, 'rt') as nf_fh:
-        if "=" in line:
-            for line in nf_fh:
+        for line in nf_fh:
+            if "=" in line:
                 k,v = line.rstrip().split(' = ')
                 config[k] = nf_to_list(v) if v.startswith('[') else v
     return config