Skip to content

Commit

Permalink
Update presentations.md
Browse files Browse the repository at this point in the history
  • Loading branch information
rpetit3 authored Oct 21, 2024
1 parent ebf0c9d commit f8ae2c8
Showing 1 changed file with 24 additions and 0 deletions.
24 changes: 24 additions & 0 deletions docs/impact-and-outreach/presentations.md
Original file line number Diff line number Diff line change
Expand Up @@ -21,6 +21,14 @@ Slides: [PDF](https://datasets.bactopia.com/media/2023-bactopia-edlb-workshop.pd

## Talks

- _Bactopia - Enhancing and expanding the Bactopia framework (October 2024)_
A brief talk presented by [Dr. Robert A Petit III](https://www.robertpetit.com) at [ASM Conference on Rapid Applied Microbial Next-Generation Sequencing and Bioinformatic Pipelines (ASMNGS)](https://asm.org/events/asm-ngs/home). This talk highlighted how Bactopia has evolved from an end-to-end pipeline to more of a framework to rapidly adapt to user needs.
Slides: [PDF](https://datasets.bactopia.com/media/2024-asmngs-bactopia.pdf)

- _Introduction to Bactopia for Bacterial Genome Analysis (June 2024)_
A talk presented by [Dr. Robert A Petit III](https://www.robertpetit.com) at the monthly Technical Outreach and Assistance for States Teams (TOAST). This talk introduced participants to Bactopia and how they can make use of it in their genomic analyses.
Slides: [PDF](https://datasets.bactopia.com/media/2024-bactopia-toast.pdf)

- _Bactopia v3 - Enhancements for public health genomic surveillance (December 2023)_
A brief talk presented by [Dr. Robert A Petit III](https://www.robertpetit.com) at the [Nextflow Summit - Boston 2023](https://summit.nextflow.io/boston/). This talk highlighted how Bactopia was rebuilt in version 3 to better support on-going genomic surveillance of bacterial pathogens.
Slides: [PDF](https://datasets.bactopia.com/media/2023-bactopiav3-nf-summit-boston.pdf)
Expand Down Expand Up @@ -65,6 +73,22 @@ Slides: [Web](https://bit.ly/3lQpZKo), [PDF](https://datasets.bactopia.com/media

## Posters

- _Expanding Bactopia as a framework for bacterial, fungal, and metagenomic analysis (September 2024)_
A poster presented by [Dr. Robert A Petit III](https://www.robertpetit.com) at the [AMD Days 2024](https://www.aphl.org/programs/infectious_disease/Pages/AMD-Days.aspx) conference outlining the latest changes in Bactopia, including new named workflows and AllTheBacteria support.
Slides: [PDF](https://datasets.bactopia.com/media/2024-amddays-bactopia.pdf)

- _Expanding Bactopia as a framework for bacterial, fungal, and metagenomic analysis (May 2024)_
A poster presented by [Dr. Robert A Petit III](https://www.robertpetit.com) at the [Sequencing to Function: Analysis and Applications for the Future](https://www.lanl.gov/conferences/sequencing-finishing-analysis-future/index.php) conference outlining the latest changes in Bactopia, including new named workflows and AllTheBacteria support.
Slides: [PDF](https://datasets.bactopia.com/media/2024-aphl-bactopia.pdf)

- _Expanding Bactopia as a framework for bacterial, fungal, and metagenomic analysis (May 2024)_
A poster presented by [Dr. Robert A Petit III](https://www.robertpetit.com) at the [APHL 2024](https://www.aphl.org/conferences/annualmeeting/Pages/default.aspx) conference outlining the latest changes in Bactopia, including new named workflows and AllTheBacteria support.
Slides: [PDF](https://datasets.bactopia.com/media/2024-aphl-bactopia.pdf)

- _Bactopia v3 - Enhancements for on-going genomic surveillance of bacterial pathogens (June 2023)_
A poster presented by [Dr. Robert A Petit III](https://www.robertpetit.com) at the [Sequencing to Function: Analysis and Applications for the Future](https://www.lanl.gov/conferences/sequencing-finishing-analysis-future/index.php) conference highlighting the latest changes in Bactopia v3.
Slides: [PDF](https://datasets.bactopia.com/media/2023-sfaf-poster.pdf)

- _Supporting the bioinformatics community by supporting Bactopia users (October 2022)_
A poster presented by [Dr. Robert A Petit III](https://www.robertpetit.com) at the [ASM Conference on Rapid Applied Microbial Next-Generation Sequencing and Bioinformatic Pipelines (ASMNGS)](https://asm.org/Events/ASM-NGS/Home) conference outlining how Bactopia was designed to reduce the maintenance burden while contributing back to the community.
Slides: [PDF](https://datasets.bactopia.com/media/2022-asmngs.pdf)
Expand Down

0 comments on commit f8ae2c8

Please sign in to comment.