Use threads local sums of C_h and I_h to reduce memory consumption

.github/workflows/doccleanup.yml

@@ -0,0 +1,28 @@
+name: Doc Preview Cleanup
+
+on:
+  pull_request:
+    types: [closed]
+
+jobs:
+  doc-preview-cleanup:
+    runs-on: ubuntu-latest
+    steps:
+      - name: Checkout gh-pages branch
+        uses: actions/checkout@v4
+        with:
+          ref: gh-pages
+
+      - name: Delete preview and history
+        run: |
+            git config user.name "Documenter.jl"
+            git config user.email "[email protected]"
+            git rm -rf "previews/PR$PRNUM"
+            git commit -m "delete preview"
+            git branch gh-pages-new $(echo "delete history" | git commit-tree HEAD^{tree})
+        env:
+            PRNUM: ${{ github.event.number }}
+
+      - name: Push changes
+        run: |
+            git push --force origin gh-pages-new:gh-pages

.github/workflows/documentation.yml

@@ -29,10 +29,14 @@ jobs:
         with:
           version: '1.10'
       - uses: julia-actions/cache@v1
-      - name: Install dependencies
-        run: julia --project=docs/ -e 'using Pkg; Pkg.develop(PackageSpec(path=pwd())); Pkg.instantiate()'
-      - name: Build and deploy
+      - name: Install Dependencies
+        run: |
+          julia --project=./docs -e '
+            using Pkg
+            Pkg.develop(PackageSpec(path=pwd()))
+            Pkg.instantiate()'
+      - name: Build and Deploy
+        run: julia -t 2 --project=./docs ./docs/make.jl
         env:
           GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} # If authenticating with GitHub Actions token
           DOCUMENTER_KEY: ${{ secrets.DOCUMENTER_KEY }} # If authenticating with SSH deploy key
-        run: julia -t 2 --project=docs/ docs/make.jl

Project.toml

@@ -6,8 +6,10 @@ version = "0.1.2"
 [deps]
 Dates = "ade2ca70-3891-5945-98fb-dc099432e06a"
 Distributions = "31c24e10-a181-5473-b8eb-7969acd0382f"
+DynamicSampling = "2083aeaf-6258-5d07-89fc-32cf5060c837"
 FileIO = "5789e2e9-d7fb-5bc7-8068-2c6fae9b9549"
 JLD2 = "033835bb-8acc-5ee8-8aae-3f567f8a3819"
+LazyArrays = "5078a376-72f3-5289-bfd5-ec5146d43c02"
 LinearAlgebra = "37e2e46d-f89d-539d-b4ee-838fcccc9c8e"
 MAT = "23992714-dd62-5051-b70f-ba57cb901cac"
 MutableNamedTuples = "af6c499f-54b4-48cc-bbd2-094bba7533c7"
@@ -20,8 +22,10 @@ StatsPlots = "f3b207a7-027a-5e70-b257-86293d7955fd"
 [compat]
 Dates = "1"
 Distributions = "0.25"
+DynamicSampling = "0.4"
 FileIO = "1.16"
 JLD2 = "0.4"
+LazyArrays = "2"
 LinearAlgebra = "1"
 MAT = "0.10"
 MutableNamedTuples = "0.1.3"

README.md

@@ -139,6 +139,14 @@ julia --proj test/runtests.jl
       </a><br />
       <p>Paris 1: Pantheon - Sorbonne</p>
     </td>
+  <td align="center">
+      <a href="https://github.com/Tortar">
+        <img src="https://avatars.githubusercontent.com/Tortar" width="100px;" alt="Adriano Meligrana"/><br />
+        <sub><b>Adriano Meligrana</b></sub>
+      </a><br />
+      <p>University of Turin</p>
+      <p>Email: <a href="mailto:[email protected]:">[email protected]</a></p>
+    </td>
   </tr>
 </table>
 

docs/make.jl

@@ -30,8 +30,7 @@ Literate.markdown(joinpath(indir, "scenario_analysis_via_overload.jl"), outdir;
 Literate.markdown(joinpath(indir, "change_expectations.jl"), outdir; credit = false)
 
 
-println("Documentation Build")
-
+@info "Building Documentation"
 makedocs(
     sitename = "BeforeIT.jl",
     format = Documenter.HTML(prettyurls = false),
@@ -47,4 +46,14 @@ makedocs(
     ],
 )
 
-deploydocs(;repo = "github.com/bancaditalia/BeforeIT.jl.git")
+@info "Deploying Documentation"
+CI = get(ENV, "CI", nothing) == "true" || get(ENV, "GITHUB_TOKEN", nothing) !== nothing
+if CI
+    deploydocs(
+        repo = "github.com/JuliaDynamics/BeforeIT.jl.git",
+        target = "build",
+        push_preview = true,
+        devbranch = "main",
+    )
+end
+println("Finished building and deploying docs.")

src/BeforeIT.jl

@@ -1,9 +1,12 @@
 module BeforeIT
 
+import Base: length
+
+using DynamicSampling
+using LazyArrays
 using LinearAlgebra
 using Random
 using StatsBase
-import Base: length
 
 # definition of agents
 include("model_init/agents.jl")