TFregulomeR-1.1.0
Compared to v1.0.0, we have made the following improvements: 1) added read enrichment for TF peaks in TFregulomeR compendium; 2) included 92 more TFBSs from MethMotif; 3) revised the function intersectPeakMatrix() to calculate read enrichment score during pair-wise comparisons; 4) designed a new function cofactorReport() to automatically generate TF cofactors along with motif sequences, DNA methylation states and read enrichment scores.