SUMOnet that take the peptide sequence centered on the candidate SUMOylation site as input and predict whether the lysine could be SUMOylated
pip install sumonetWe strongly recomment using virtual environment for these package requirements.
All packages will be installed automatically by pip.
The following package versions were used to get evaluation results in our paper.
python 3.6.6
numpy 1.19.5
scikit-learn 0.24.2
joblib 1.0.0
pandas 1.0.5
tensorflow 2.4.0
keras 2.3.1
loguru 0.7.2Please visit our Tutorial Page
If you use SUMOnet in your work, please do cite us:
Dilekoglu, B., Tastan, O.: Sumonet: Deep sequential prediction of sumoylation sites. bioRxiv (2023).