Added a .gitignore file to prevent reading of output files to git. Al…

…so added shell scripts to execute and quickly run the script. Mainly for use in a batch job submission script

.gitignore

@@ -0,0 +1,5 @@
+data/LundFiles/
+data/RootFiles/
+*.root
+*.lund
+build/

Config.json

@@ -6,8 +6,8 @@
     // and degrees for angles.
     // n_events indicates number of attempts
 	// "experiment" : "eic" or "solid"
-    "experiment" : "solid",
-    //"experiment" : "eic",
+    //"experiment" : "solid",
+    "experiment" : "eic",
 
 //	"file_name" : "example_output",
     "n_events" : 10000,

Config_EIC.json

@@ -0,0 +1,46 @@
+{
+	// This is an exmaple Json configuration file that will accept 
+	// parameters for both EIC and Solid simulation.
+    //Config
+    // All values should use units of MeV for energies and momenta,
+    // and degrees for angles.
+    // n_events indicates number of attempts
+	// "experiment" : "eic" or "solid"
+   // "experiment" : "solid",
+    "experiment" : "eic",
+
+    "file_name" : "DEMPGen_1000000_1",
+    "n_events" : 1000000,
+    "output_file" : "RootFiles/Test.root",
+
+	//**************************************
+    /// This section if for EIC simulation only
+	"Targ_dir" : 1,                // Target Direction (1->Up, 2->Down)
+	"Kinematics_type" : 1,         // Kinematics type (1->FF, 2->TSSA)
+
+	//**************************************
+	/// This section is Solid only
+
+    "beam_energy": 11000,
+    "targ_pol_x": 0,
+    "targ_pol_y": 0,
+    "targ_pol_z": 0,
+    "scat_elec_Emin": 1100.0,
+    "scat_elec_Emax": 9900.0,
+    "scat_elec_thetamin": 5.0,
+    "scat_elec_thetamax": 27.0,
+    "prod_pion_thetamin": 5.0,
+    "prod_pion_thetamax": 20.0,
+    "multiple_scattering": false,
+    "ionization": false,
+    "bremsstrahlung": false,
+    "final_state_interaction": false,
+    "fermi_momentum": false,
+    "weight_cut": true,
+    "w_cut": true,
+    "w_min": 2,
+    "Qsq_cut": true,
+    "Qsq_min": 4,
+    "t_cut": true,
+    "t_min": -1.2
+}

batch_runEIC.sh

@@ -0,0 +1,35 @@
+#! /bin/bash                                                                                                        
+# Batch submission job script, executes run_EIC_batch.csh script
+
+echo "Running as ${USER}" # Checks who you're running this as'
+NumFiles=$1
+NumEvents=$2
+
+NumFiles = `expr $NumFiles + 1` 
+##Output history file##                                                                               
+historyfile=hist.$( date "+%Y-%m-%d_%H-%M-%S" ).log # Creates a log file
+##Output batch script##       
+batch="${USER}_Job.txt" # The name of the job submission script it'll create each time
+auger="augerID.tmp"
+
+i=1
+while [[ $i -le $NumFiles ]]; do
+    echo "Running ${batch} for file ${i}"
+    cp /dev/null ${batch}
+    echo "#!/bin/csh" >> ${batch} # Tells your job which shell to run in
+    echo "#PBS -N DEMPGen_${NumEvents}_${i}" >> ${batch} # Name your job                     
+    echo "#PBS -m abe" >> ${batch} # Email you on job start, end or error
+    echo "#PBS -M ${USER}@jlab.org" >>${batch} # Your email address, change it to be what you like
+    echo "#PBS -r n" >> ${batch} # Don't re-run if it crashes
+    echo "#PBS -o  /home/${USER}/trq_output/DEMPGen_${NumEvents}_${i}.out" >> ${batch} # Output directory and file name, set to what you like
+    echo "#PBS -e  /home/${USER}/trq_output/DEMPGen_${NumEvents}_${i}.err" >> ${batch} # Error output directory and file name
+    echo "date" >> ${batch} 
+    echo "cd /home/apps/eic_evgen/" >> ${batch} # Tell your job to go to the directory with the script you want to run
+    echo "./run_EIC_Batch.csh ${i} ${NumEvents}" >> ${batch} # Run your script, change this to what you like
+    echo "date">>${batch}
+    echo "exit">>${batch} # End of your job script
+    echo "Submitting batch"
+    eval "qsub ${batch} 2>/dev/null" # Use qsub to actually submit your job
+    echo " "
+    i=$(( $i + 1 ))
+done

run_EIC_batch.csh

@@ -0,0 +1,11 @@
+#!/bin/csh
+
+set FileNum=$1
+set NumEvents=$2
+echo "Running target polarisation up, FF setting for file $FileNum with $NumEvents events per file"
+sed -i 's/"file_name" \:.*/"file_name" \: "DEMPGen_'$NumEvents'_'$FileNum'",/' Config_EIC.json
+sed -i 's/"n_events" \:.*/"n_events" \: '$NumEvents',/' Config_EIC.json 
+cd data/
+./../build/DEMPgen ../Config_EIC.json
+sleep 5
+mv "LundFiles/eic_input_DEMPGen_"$NumEvents"_"$FileNum".dat" "LundFiles/eic_DEMPGen_"$NumEvents"_"$FileNum".lund"

sjdkay_Job.txt

@@ -0,0 +1,12 @@
+#!/bin/csh
+#PBS -N DEMPGen_1000000_5
+#PBS -m abe
+#PBS -M [email protected]
+#PBS -r n
+#PBS -o  /home/sjdkay/trq_output/DEMPGen_1000000_5.out
+#PBS -e  /home/sjdkay/trq_output/DEMPGen_1000000_5.err
+date
+cd /home/apps/eic_evgen/
+./run_EIC_Batch.csh 5 1000000
+date
+exit