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import bio.tools data on Sun Oct 15 01:08:41 UTC 2023
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,28 @@ | ||
| { | ||
| "additionDate": "2023-10-13T02:47:57.426429Z", | ||
| "biotoolsCURIE": "biotools:drugsim2dr", | ||
| "biotoolsID": "drugsim2dr", | ||
| "description": "A systematic biology tool was developed to repurpose drugs via a drug-drug functional similarity network. 'DrugSim2DR' first predict drug-drug functional similarity in the context of specific disease, and then using the similarity constructed a weighted drug similarity network. Finally, it used a network propagation algorithm on the network to identify drugs with significant target abnormalities as candidate drugs.", | ||
| "download": [ | ||
| { | ||
| "type": "Software package", | ||
| "url": "https://cran.r-project.org/web/src/contrib/DrugSim2DR_0.1.1.tar.gz", | ||
| "version": "0.1.1" | ||
| }, | ||
| { | ||
| "type": "Source code", | ||
| "url": "https://github.com/hanjunwei-lab/DrugSim2DR", | ||
| "version": "0.1.1" | ||
| } | ||
| ], | ||
| "editPermission": { | ||
| "type": "private" | ||
| }, | ||
| "homepage": "https://cran.r-project.org/web//packages/DrugSim2DR/index.html", | ||
| "lastUpdate": "2023-10-13T02:47:57.429884Z", | ||
| "name": "DrugSim2DR", | ||
| "owner": "Json", | ||
| "version": [ | ||
| "0.1.1" | ||
| ] | ||
| } |
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|---|---|---|
| @@ -0,0 +1,26 @@ | ||
| { | ||
| "additionDate": "2023-10-13T09:57:26.968130Z", | ||
| "biotoolsCURIE": "biotools:drugsim2dr_0.1.1", | ||
| "biotoolsID": "drugsim2dr_0.1.1", | ||
| "description": "A systematic biology tool was developed to repurpose drugs via a drug-drug functional similarity network. 'DrugSim2DR' first predict drug-drug functional similarity in the context of specific disease, and then using the similarity constructed a weighted drug similarity network. Finally, it used a network propagation algorithm on the network to identify drugs with significant target abnormalities as candidate drugs.", | ||
| "download": [ | ||
| { | ||
| "type": "Software package", | ||
| "url": "https://cran.r-project.org/web/packages/DrugSim2DR/" | ||
| }, | ||
| { | ||
| "type": "Source code", | ||
| "url": "https://github.com/hanjunwei-lab/DrugSim2DR" | ||
| } | ||
| ], | ||
| "editPermission": { | ||
| "type": "private" | ||
| }, | ||
| "homepage": "https://cran.r-project.org/web/packages/DrugSim2DR/", | ||
| "lastUpdate": "2023-10-13T09:57:26.970631Z", | ||
| "name": "DrugSim2DR_0.1.1", | ||
| "owner": "Json", | ||
| "version": [ | ||
| "0.1.1" | ||
| ] | ||
| } |
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -1,12 +1,18 @@ | ||
| { | ||
| "accessibility": "Open access", | ||
| "additionDate": "2021-05-27T09:02:10Z", | ||
| "biotoolsCURIE": "biotools:qiime2", | ||
| "biotoolsID": "qiime2", | ||
| "confidence_flag": "tool", | ||
| "cost": "Free of charge", | ||
| "credit": [ | ||
| { | ||
| "email": "[email protected]", | ||
| "name": "Greg Caporaso", | ||
| "orcidid": "https://orcid.org/0000-0002-8865-1670", | ||
| "typeRole": [ | ||
| "Primary contact" | ||
| ], | ||
| "url": "https://caporasolab.us/" | ||
| } | ||
| ], | ||
|
|
@@ -34,7 +40,20 @@ | |
| "editPermission": { | ||
| "type": "private" | ||
| }, | ||
| "elixirCommunity": [ | ||
| "Galaxy" | ||
| ], | ||
| "function": [ | ||
| { | ||
| "cmd": "deblur denoise-16S", | ||
| "note": "Deblur sequences using a 16S positive filter.\n\nPerform sequence quality control for Illumina data using the Deblur workflow with a 16S reference as a positive filter. Only forward reads are supported at this time. The specific reference used is the 88% OTUs from Greengenes 13_8. This mode of operation should only be used when data were generated from a 16S amplicon protocol on an Illumina platform. The reference is only used to assess whether each sequence is likely to be 16S by a local alignment using SortMeRNA with a permissive e-value; the reference is not used to characterize the sequences.", | ||
| "operation": [ | ||
| { | ||
| "term": "Sequencing quality control", | ||
| "uri": "http://edamontology.org/operation_3218" | ||
| } | ||
| ] | ||
| }, | ||
| { | ||
| "operation": [ | ||
| { | ||
|
|
@@ -56,13 +75,20 @@ | |
| ] | ||
| } | ||
| ], | ||
| "homepage": "https://qiime2.org/", | ||
| "homepage": "https://qiime2.org", | ||
| "language": [ | ||
| "Python" | ||
| ], | ||
| "lastUpdate": "2021-08-02T10:47:25Z", | ||
| "lastUpdate": "2023-10-12T19:54:24.104987Z", | ||
| "license": "BSD-3-Clause", | ||
| "link": [ | ||
| { | ||
| "note": "deblur denoise-16S Galaxy tool", | ||
| "type": [ | ||
| "Galaxy service" | ||
| ], | ||
| "url": "https://toolshed.g2.bx.psu.edu/repository/view_repository?id=167977019c8b8d17" | ||
| }, | ||
| { | ||
| "type": [ | ||
| "Issue tracker" | ||
|
|
@@ -76,7 +102,8 @@ | |
| "url": "https://github.com/qiime2/qiime2" | ||
| } | ||
| ], | ||
| "name": "QIIME2.0", | ||
| "maturity": "Mature", | ||
| "name": "QIIME 2", | ||
| "owner": "Kigaard", | ||
| "publication": [ | ||
| { | ||
|
|
@@ -420,18 +447,31 @@ | |
| "name": "von Hippel M." | ||
| } | ||
| ], | ||
| "citationCount": 1938, | ||
| "citationCount": 7952, | ||
| "date": "2019-08-01T00:00:00Z", | ||
| "journal": "Nature Biotechnology", | ||
| "title": "Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2" | ||
| }, | ||
| "type": [ | ||
| "Primary" | ||
| ] | ||
| ], | ||
| "version": "2.0" | ||
| } | ||
| ], | ||
| "relation": [ | ||
| { | ||
| "biotoolsID": "mafft", | ||
| "type": "uses" | ||
| }, | ||
| { | ||
| "biotoolsID": "qiime", | ||
| "type": "isNewVersionOf" | ||
| } | ||
| ], | ||
| "toolType": [ | ||
| "Workbench" | ||
| "Command-line tool", | ||
| "Library", | ||
| "Suite" | ||
| ], | ||
| "topic": [ | ||
| { | ||
|
|
@@ -450,5 +490,8 @@ | |
| "term": "Phylogeny", | ||
| "uri": "http://edamontology.org/topic_0084" | ||
| } | ||
| ], | ||
| "version": [ | ||
| "2.0" | ||
| ] | ||
| } | ||
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| Original file line number | Diff line number | Diff line change |
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| { | ||
| "additionDate": "2023-10-12T12:12:52.620016Z", | ||
| "biotoolsCURIE": "biotools:ular_toto", | ||
| "biotoolsID": "ular_toto", | ||
| "description": "Ulartoto terpercaya merupakan situs yang sudah berlisensi resmi. Dengan min depo 5rb dan min bet 100 rupiah", | ||
| "editPermission": { | ||
| "type": "private" | ||
| }, | ||
| "homepage": "https://ularlucu.com/", | ||
| "lastUpdate": "2023-10-12T12:12:52.622834Z", | ||
| "name": "Ular toto", | ||
| "owner": "Ular.toto" | ||
| } |