Merge branch 'dev' into biotools #1
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: Selenium tests | |
| on: | |
| push: | |
| paths-ignore: | |
| - 'doc/**' | |
| pull_request: | |
| paths-ignore: | |
| - 'doc/**' | |
| schedule: | |
| # Run at midnight UTC every Tuesday | |
| - cron: '0 0 * * 2' | |
| env: | |
| GALAXY_CONFIG_GALAXY_URL_PREFIX: '/galaxypf' | |
| GALAXY_TEST_DBURI: 'postgresql://postgres:postgres@localhost:5432/galaxy?client_encoding=utf8' | |
| GALAXY_TEST_RAISE_EXCEPTION_ON_HISTORYLESS_HDA: '1' | |
| GALAXY_TEST_SELENIUM_RETRIES: 1 | |
| GALAXY_TEST_SKIP_FLAKEY_TESTS_ON_ERROR: 1 | |
| YARN_INSTALL_OPTS: --frozen-lockfile | |
| GALAXY_CONFIG_SQLALCHEMY_WARN_20: '1' | |
| concurrency: | |
| group: ${{ github.workflow }}-${{ github.ref }} | |
| cancel-in-progress: true | |
| jobs: | |
| setup-selenium: | |
| uses: ./.github/workflows/setup_selenium.yaml | |
| build-client: | |
| uses: ./.github/workflows/build_client.yaml | |
| test: | |
| name: Test | |
| needs: [setup-selenium, build-client] | |
| runs-on: ubuntu-latest | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| python-version: ['3.8'] | |
| chunk: [0, 1, 2] | |
| services: | |
| postgres: | |
| image: postgres:13 | |
| env: | |
| POSTGRES_USER: postgres | |
| POSTGRES_PASSWORD: postgres | |
| POSTGRES_DB: postgres | |
| ports: | |
| - 5432:5432 | |
| steps: | |
| - if: github.event_name == 'schedule' | |
| run: | | |
| echo "GALAXY_CONFIG_OVERRIDE_METADATA_STRATEGY=extended" >> $GITHUB_ENV | |
| echo "GALAXY_CONFIG_OVERRIDE_OUTPUTS_TO_WORKING_DIRECTORY=true" >> $GITHUB_ENV | |
| - uses: actions/checkout@v4 | |
| with: | |
| path: 'galaxy root' | |
| - uses: actions/setup-node@v4 | |
| with: | |
| node-version: '18.12.1' | |
| cache: 'yarn' | |
| cache-dependency-path: 'galaxy root/client/yarn.lock' | |
| - uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Get full Python version | |
| id: full-python-version | |
| shell: bash | |
| run: echo "version=$(python -c 'import sys; print("-".join(str(v) for v in sys.version_info))')" >> $GITHUB_OUTPUT | |
| - name: Cache pip dir | |
| uses: actions/cache@v4 | |
| with: | |
| path: ~/.cache/pip | |
| key: pip-cache-${{ matrix.python-version }}-${{ hashFiles('galaxy root/requirements.txt') }} | |
| - name: Cache galaxy venv | |
| uses: actions/cache@v4 | |
| with: | |
| path: 'galaxy root/.venv' | |
| key: gxy-venv-${{ runner.os }}-${{ steps.full-python-version.outputs.version }}-${{ hashFiles('galaxy root/requirements.txt') }}-selenium | |
| - name: Restore client cache | |
| uses: actions/cache@v4 | |
| with: | |
| key: galaxy-static-${{ needs.build-client.outputs.commit-id }} | |
| path: 'galaxy root/static' | |
| - name: Run tests | |
| run: ./run_tests.sh --coverage -selenium lib/galaxy_test/selenium -- --num-shards=3 --shard-id=${{ matrix.chunk }} | |
| working-directory: 'galaxy root' | |
| - uses: codecov/codecov-action@v3 | |
| with: | |
| flags: selenium | |
| working-directory: 'galaxy root' | |
| - uses: actions/upload-artifact@v4 | |
| if: failure() | |
| with: | |
| name: Selenium test results (${{ matrix.python-version }}, ${{ matrix.chunk }}) | |
| path: 'galaxy root/run_selenium_tests.html' | |
| - uses: actions/upload-artifact@v4 | |
| if: failure() | |
| with: | |
| name: Selenium debug info (${{ matrix.python-version }}, ${{ matrix.chunk }}) | |
| path: 'galaxy root/database/test_errors' |