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Replace /bin/sh with a wrapper to /bin/bash #124

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Replace /bin/sh with a wrapper to /bin/bash

Replace /bin/sh with a wrapper to /bin/bash #124

Triggered via pull request March 11, 2024 10:11
@martin-gmartin-g
synchronize #77
martin-g:smarter-bin-sh
Status Failure
Total duration 1m 24s
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create-env.yaml

on: pull_request
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1 error and 1 warning
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Error: buildah exited with code 1 Trying to pull quay.io/bioconda/bioconda-utils-build-env-cos7:2.11.1... Getting image source signatures Copying blob sha256:9ea876aef33629f27600cb8b5953073245815a2f04260556631fdc6f1df00aa6 Copying blob sha256:73a998fc5c2f0f94a01f694f024c952904c376fac4033ac1cf2c31791dfeb2cc Copying blob sha256:87d83c099b7973e804f0f99203255bdcec0a9c8518bb5f53859541919a6956e1 Copying blob sha256:2d473b07cdd5f0912cd6f1a703352c82b512407db6b05b43f2553732b55df3bc Copying blob sha256:4b5358b2c77515e93cecc8c5372c6744590a1ef615d19740b175fe24e61bd697 Copying blob sha256:1aecd2089134955e2eb04d9d0fb4e0b5aa413845be042e7dc558120da7e3a0c8 Copying blob sha256:2d473b07cdd5f0912cd6f1a703352c82b512407db6b05b43f2553732b55df3bc Copying blob sha256:87d83c099b7973e804f0f99203255bdcec0a9c8518bb5f53859541919a6956e1 Copying blob sha256:65d7db26604ec939207477f27914d53e452a62ec1d399d286e64688721807740 Copying blob sha256:1aecd2089134955e2eb04d9d0fb4e0b5aa413845be042e7dc558120da7e3a0c8 Copying blob sha256:4b5358b2c77515e93cecc8c5372c6744590a1ef615d19740b175fe24e61bd697 Copying blob sha256:315ce4a0040598976cc27f732d23a821a69e5c99b69f5c8436d90c53a84533e2 Copying blob sha256:73a998fc5c2f0f94a01f694f024c952904c376fac4033ac1cf2c31791dfeb2cc Copying blob sha256:ef1aae6320b8af7775d80d6e2167c56667075bfad4b93cc7571f14be70a53ae2 Copying blob sha256:9e456648f13f8e34f1e0210ccc1f084fb428fb799e76eb356f6e0e670ebb594d Copying blob sha256:9ea876aef33629f27600cb8b5953073245815a2f04260556631fdc6f1df00aa6 Copying blob sha256:2c35ec0f571e426792f2fa7974b0619bc3b18a4725f1e58a6c42373c0ba9b95c Copying blob sha256:65d7db26604ec939207477f27914d53e452a62ec1d399d286e64688721807740 Copying blob sha256:abb4b4596856c1782d67fadb9d37192e6c1cee4581a6a7661b542bfab85dc799 Copying blob sha256:ef1aae6320b8af7775d80d6e2167c56667075bfad4b93cc7571f14be70a53ae2 Copying blob sha256:ad55267dfd56b85456fb7fe7612b11c41feeaf8f9462138e52952ebc1899dd1c Copying blob sha256:2c35ec0f571e426792f2fa7974b0619bc3b18a4725f1e58a6c42373c0ba9b95c Copying blob sha256:89f5892f29c16129c1a3f87796916bda65f9dc27ebd8e12d6ff8487af3d663cd Copying blob sha256:9e456648f13f8e34f1e0210ccc1f084fb428fb799e76eb356f6e0e670ebb594d Copying blob sha256:315ce4a0040598976cc27f732d23a821a69e5c99b69f5c8436d90c53a84533e2 Copying blob sha256:ad55267dfd56b85456fb7fe7612b11c41feeaf8f9462138e52952ebc1899dd1c Copying blob sha256:abb4b4596856c1782d67fadb9d37192e6c1cee4581a6a7661b542bfab85dc799 Copying blob sha256:89f5892f29c16129c1a3f87796916bda65f9dc27ebd8e12d6ff8487af3d663cd Copying config sha256:15629811c7c9c00af9215860859ba2a128a4d9b78b0e61cc086e14c2c2d18e9e Writing manifest to image destination Storing signatures Trying to pull quay.io/bioconda/base-glibc-busybox-bash:latest... Getting image source signatures Copying blob sha256:4ca545ee6d5db5c1170386eeb39b2ffe3bd46e5d4a73a9acbebc805f19607eb3 Copying blob sha256:fa7e54f17dc087a7664298695e36b2bea9e6f3dc43de4d86e58dd3bf3c5c449a Copying blob sha256:4ca545ee6d5db5c1170386eeb39b2ffe3bd46e5d4a73a9acbebc805f19607eb3 Copying blob sha256:fa7e54f17dc087a7664298695e36b2bea9e6f3dc43de4d86e58dd3bf3c5c449a Copying config sha256:f6720ecf85d7b7db0fe7cdeb93dce768c2d80dc0f7ed1dbeb45112490254c27d Writing manifest to image destination Storing signatures wget: note: TLS certificate validation not implemented + requirements_file=./requirements.txt + conda_install_prefix=/opt/create-env ++ pwd + miniconda_boostrap_prefix=/tmp/work/miniconda + tools= + find -print0 -maxdepth 0 + xargs -0 true + sed -e '' + sh ./miniconda.sh -b -p /tmp/work/miniconda + . /tmp/work/miniconda/etc/profile.d/conda.sh ++ export CONDA_EXE=/tmp/work/miniconda/bin/conda ++ CONDA_EXE=/tmp/work/miniconda/bin/conda ++ export _CE_M= ++ _CE_M= ++ export _CE_CONDA= ++ _CE_CONDA= ++ export CONDA_PYTHON_EXE=/tmp/work/miniconda/bin/python ++ CONDA_PYTHON_EXE=/tmp/work/miniconda/bin/python ++ '[' -z '' ']' ++ export CONDA_SHLVL=0 ++ CONDA_SHLVL=0 ++ '[' -n '' ']' ++++ dirname /tmp/work/miniconda/bin/conda +++ dirname /tmp/work/miniconda/bin ++ PATH=/tmp/work/miniconda/condabin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/s
Build & Push
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: docker/setup-qemu-action@v2. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.