Update unitig-caller to 1.3.1 (#52647)

* Update unitig-caller to 1.3.1 * Update meta.yaml * Update build.sh --------- Co-authored-by: Joshua Zhuang <[email protected]>
bioconda · Dec 6, 2024 · 1e862f4 · 1e862f4
1 parent 1d2edc6
commit 1e862f4
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diff --git a/recipes/unitig-caller/build.sh b/recipes/unitig-caller/build.sh
@@ -1,4 +1,7 @@
 #!/bin/bash
-export CXXFLAGS="$CXXFLAGS -std=c++20"
+
+export LDFLAGS="${LDFLAGS} -L${PREFIX}/lib"
+
+export CXXFLAGS="$CXXFLAGS -O3 -std=c++20 -I${PREFIX}/include"
 export UC_INSTALL="conda"
-$PYTHON -m pip install . --ignore-installed --no-deps -vv
+$PYTHON -m pip install . --no-build-isolation --no-deps --no-cache-dir -vvv
diff --git a/recipes/unitig-caller/meta.yaml b/recipes/unitig-caller/meta.yaml
@@ -1,23 +1,22 @@
 {% set name = "unitig-caller" %}
-{% set version = "1.3.0" %}
+{% set version = "1.3.1" %}
 
 package:
   name: {{ name|lower }}
   version: {{ version }}
 
 source:
   url: https://github.com/bacpop/{{ name|lower }}/archive/v{{ version }}.tar.gz
-  sha256: 9059db7042c9b6ae240974fc474bd51d092d1f8795009a4e9e969abfc293c007
+  sha256: e6b41fc96633fb321e3248272bde63e511b9ba1deac7d1394651c71005517d61
   patches:
     - 0001-No-experimental.patch
 
 build:
-  number: 4
-  skip: True  # [py27]
+  number: 0
   entry_points:
     - unitig-caller = unitig_caller.__main__:main
   run_exports:
-    - {{ pin_subpackage(name, max_pin="x.x") }}
+    - {{ pin_subpackage(name, max_pin="x") }}
 
 requirements:
   build:
@@ -32,7 +31,7 @@ requirements:
     - zlib
     - bzip2
     - bifrost >=1.3.0
-    - libgomp      # [linux64]
+    - libgomp      # [linux]
     - llvm-openmp  # [osx]
   run:
     - python
@@ -51,4 +50,4 @@ about:
    license_family: APACHE
    license_file: LICENSE
    summary: Determines presence/absence of sequence elements in bacterial sequence data.
-
+   dev_url: https://github.com/bacpop/unitig-caller