Add samstrip (#53019)

* Add samstrip * Fix build.sh --------- Co-authored-by: Martin Grigorov <[email protected]>
bioconda · Jan 3, 2025 · 5d14c87 · 5d14c87
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diff --git a/recipes/samstrip/build.sh b/recipes/samstrip/build.sh
@@ -0,0 +1,7 @@
+#!/bin/bash
+
+set -xeuo
+
+cargo-bundle-licenses --format yaml --output THIRDPARTY.yml
+# Build statically linked binary with Rust
+RUST_BACKTRACE=1 cargo install -v --locked --no-track --root $PREFIX --path .
diff --git a/recipes/samstrip/meta.yaml b/recipes/samstrip/meta.yaml
@@ -0,0 +1,42 @@
+{% set name = "samstrip" %}
+{% set version = "0.2.1" %}
+{% set sha256 = "c14b4f0126bb28d7f74efc2d36d09cc22025b39c8fe802b9d37c9b75ada45095" %}
+
+package:
+  name: {{ name }}
+  version: {{ version }}
+
+build:
+  number: 0
+  run_exports:
+    - {{ pin_subpackage(name|lower, max_pin="x.x") }}
+
+source:
+  url: https://github.com/jakobnissen/{{ name }}/archive/refs/tags/v{{ version }}.tar.gz
+  sha256: {{ sha256 }}
+
+requirements:
+  build:
+    - {{ compiler("rust") }}
+    - cargo-bundle-licenses
+  host:
+  run:
+
+test:
+  commands:
+    - samstrip --help
+
+about:
+  home: https://github.com/jakobnissen/samstrip
+  license: MIT
+  license_file: 
+    - LICENSE
+    - THIRDPARTY.yml
+  summary: Strip SAM files of data not needed for alignment computations.
+
+extra:
+  recipe-maintainers:
+    - apcamargo
+  additional-platforms:
+    - linux-aarch64
+    - osx-arm64