Bulk arm builds #43995
Bulk arm builds #43995
Conversation
Co-authored-by: Yikun Jiang <[email protected]>
Co-authored-by: Yikun Jiang <[email protected]>
Co-authored-by: Yikun Jiang <[email protected]>
Co-authored-by: Yikun Jiang <[email protected]>
Co-authored-by: Yikun Jiang <[email protected]>
Co-authored-by: Yikun Jiang <[email protected]>
Co-authored-by: Yikun Jiang <[email protected]>
* abort job if platform not found * sudo for yq call * debug yq error * separate regex * more debugging * check yq version * more debugging * even more debugging * check shell * more debugging * isolate debug checks * trial and error * test * download correct yq version * check arch of yq * Download ARM build of yq * Add platform to recipe * dynamically get yq platform * test skip * move check to script * permissions * swap argument order
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@bgruening got it working, see bioconda/bioconda-utils#941. That allowed the container to upload, BUT it was set to private. I figured out I needed to run the change visibility GitHub Action workflow over on bioconda-utils to get it public. After that, I was able to successfully run docker run --platform linux/arm64 -it quay.io/biocontainers/test:0.1--h73052cd_7🎉 Only thing I can think of that would cause it to stay private is that the CircleCI token needs to be updated. I don't have access to biocontainers on quay.io though. Can you verify that the env vars in the CircleCI settings for bioconda-recipes are up to date? |
Port the fixes in f482801, which were in `pkg_test.py`, to `upload.py` as well. ping @bgruening this is what was causing that strangely different behavior in `mulled-build`'s `build-and-test` and `push` over in bioconda/bioconda-recipes#43995. After reviewing this and tracking down all the various moving parts, it's *really* unclear how the various docker images are specified throughout all our machinery. Explicit and implicit env vars set at various times, sometimes overridden by default args, sometimes not, sometimes hard-coded deep in bioconda-utils. Needs a refactor, where everything gets specified just once in bioconda-common and used everywhere. That's for another day though... --------- Co-authored-by: Björn Grüning <[email protected]>
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@BiocondaBot please fetch artifacts |
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No artifacts found on the most recent Azure build. Either the build failed, the artifacts have were removed due to age, or the recipe was blacklisted/skipped. |
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So that fetching failed; looking more closely, the bot will need quite a bit more work to support circleci artifacts. However this is implemented in bioconda-utils with handle-merged-pr, so I'll try using the test recipe in a separate PR to see if everything but the bot's artifact fetching works. |
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Now that #40550 has been merged, closing this. |
Port .github/workflows/bulk.yml to Circle CI for ARM builds.
To Do:
Edited by @daler 2023-11-26. Note to future readers: this PR has become a sort of sandbox for all things ARM. There is no intention that this should ever be merged. Instead, working parts should be cherry-picked or manually ported over to the
arm-buildsbranch, #40550