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Add hicberg v1.0.0 #53002

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Jan 2, 2025
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72 changes: 72 additions & 0 deletions recipes/hicberg/meta.yaml
Original file line number Diff line number Diff line change
@@ -0,0 +1,72 @@
{% set name = "hicberg" %}
{% set version = "1.0.0" %}

package:
name: "{{ name|lower }}"
version: "{{ version }}"

source:
url: "https://pypi.io/packages/source/{{ name[0] }}/{{ name }}/{{ name }}-{{ version }}.tar.gz"
sha256: 8ce20f1fa8b15244d880544de214adf6105432cebfab4c0eb6b4448d329f5b91

build:
number: 0
noarch: generic
entry_points:
- hicberg=hicberg.__main__:cli
script: "{{ PYTHON }} -m pip install . -vv --no-deps --no-build-isolation"
run_exports:
- {{ pin_subpackage('hicberg', max_pin="x") }} # Added missing closing brace

requirements:
host:
- bioframe
- biopython
- click
- cooler
- funcy
- hicstuff
- matplotlib-base
- numpy
- pandas
- pip
- pysam
- python
- scikit-learn
- scipy
- statsmodels
run:
- bioframe
- biopython
- click
- cooler
- funcy
- hicstuff
- matplotlib-base
- numpy
- pandas
- pysam
- python
- scikit-learn
- scipy
- statsmodels

test:
imports:
- hicberg
- tests
commands:
- hicberg --help

about:
home: "https://github.com/sebgra/hicberg"
license: MIT
license_family: MIT
license_file: # Empty string is valid YAML
summary: "Statistical profiling based tool for contact data (Hi-C, ChIA-PET, Capture-C, etc.) and genomics data reconstruction"
doc_url: # Empty string is valid YAML
dev_url: # Empty string is valid YAML
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Suggested change
dev_url: # Empty string is valid YAML
dev_url: https://github.com/sebgra/hicberg


extra:
recipe-maintainers:
- sebgra
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