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Update kegg-pathways-completeness to 1.2.1 #53291

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merged 7 commits into from
Jan 21, 2025
Merged

Update kegg-pathways-completeness to 1.2.1 #53291

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a207645
Update kegg-pathways-completeness to 1.1.0
BiocondaBot Jan 17, 2025
0189d93
Update meta.yaml
mencian Jan 17, 2025
730a1bc
Update meta.yaml
mencian Jan 17, 2025
1999f81
Update kegg-pathways-completeness to 1.2.0
BiocondaBot Jan 20, 2025
59b1da0
Update kegg-pathways-completeness to 1.2.1
BiocondaBot Jan 20, 2025
986953b
Update meta.yaml
mencian Jan 21, 2025
182d363
Update meta.yaml
mencian Jan 21, 2025
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31 changes: 15 additions & 16 deletions recipes/kegg-pathways-completeness/meta.yaml
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Original file line number Diff line number Diff line change
@@ -1,13 +1,13 @@
{% set name = "kegg-pathways-completeness" %}
{% set version = "1.0.5" %}
{% set version = "1.2.1" %}

package:
name: {{ name|lower }}
version: {{ version }}

source:
url: https://pypi.io/packages/source/{{ name[0] }}/{{ name }}/kegg_pathways_completeness-{{ version }}.tar.gz
sha256: b7ec0b1ceabd168296a18ab1184a26e40cfa4fdcaf156cd1d75b0e12c51f8aaa
sha256: 6650268d18232b7e523f0b0f2c50e7ba6d2c40d8ae3e7bebd051282d4d08dee1

build:
entry_points:
Expand All @@ -16,10 +16,10 @@ build:
- generate_hmmtable = kegg_pathways_completeness.bin.generate_hmmtable.hmmscan_tab:main
- parsing_hmmscan = kegg_pathways_completeness.bin.generate_hmmtable.parsing_hmmscan:main
noarch: python
script: {{ PYTHON }} -m pip install . -vv --no-deps --no-build-isolation
script: {{ PYTHON }} -m pip install . -vvv --no-deps --no-build-isolation --no-cache-dir
number: 0
run_exports:
- {{ pin_subpackage('kegg-pathways-completeness', max_pin="x.x") }}
- {{ pin_subpackage('kegg-pathways-completeness', max_pin="x") }}

requirements:
host:
Expand All @@ -28,27 +28,26 @@ requirements:
- pip
run:
- python >=3.10
- biopython ==1.83
- networkx ==3.3
- python-graphviz ==0.20.3
- biopython >=1.83
- networkx >=3.3
- python-graphviz >=0.20.3
- pydot >=3.0.3

test:
imports:
- kegg_pathways_completeness
commands:
- pip check
- give_pathways --help
- plot_completeness_graphs --help
- generate_hmmtable --help
- parsing_hmmscan --help
requires:
- pip
#commands:
#- give_pathways --help
#- plot_completeness_graphs --help
#- generate_hmmtable --help
#- parsing_hmmscan --help

about:
summary: The tool counts completeness of each KEGG pathway for protein sequences.
summary: "The tool counts completeness of each KEGG pathway for protein sequences."
home: https://github.com/EBI-Metagenomics/kegg-pathways-completeness-tool
license: Apache-2.0
license_file: LICENSE
dev_url: https://github.com/EBI-Metagenomics/kegg-pathways-completeness-tool

extra:
recipe-maintainers:
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