MAINT: adjust to change in pd.DataFrame interaction with > #75
Workflow file for this run
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| name: Release | |
| on: [push, pull_request] | |
| jobs: | |
| build_sdist: | |
| name: Build sdist | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: Build distribution | |
| run: | | |
| export RELEASE_VERSION=${{ github.ref_name }} | |
| pip install numpy cython | |
| pipx run build --sdist | |
| - uses: actions/upload-artifact@v3 | |
| with: | |
| name: dist-artifacts | |
| path: dist/*.tar.gz | |
| # adapted from | |
| # https://github.com/biopython/biopython/blob/master/.github/workflows/ci.yml | |
| build_wheels: | |
| name: Build wheels (py ${{ matrix.pyver }}) ${{ matrix.os }} | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| matrix: | |
| os: [ubuntu-latest, macos-latest] | |
| pyver: ["37", "38", "39", "310", "311"] | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: Set up Python | |
| uses: actions/setup-python@v2 | |
| with: | |
| python-version: 3.9 | |
| - name: Install Python packaging tools | |
| run: | | |
| export RELEASE_VERSION=${{ github.ref_name }} | |
| pip install numpy cython | |
| python -m pip install --upgrade pip setuptools wheel | |
| # https://github.com/pypa/cibuildwheel/blob/main/examples/github-deploy.yml | |
| - name: Build wheels (py ${{ matrix.pyver }}) Linux | |
| if: matrix.os == 'ubuntu-latest' | |
| env: | |
| CIBW_ARCHS_LINUX: x86_64 | |
| CIBW_SKIP: "*-musllinux*" | |
| CIBW_BUILD: "cp${{ matrix.pyver }}-*" | |
| uses: pypa/[email protected] | |
| - name: Build wheels (py ${{ matrix.pyver }}) MacOS | |
| if: matrix.os == 'macos-latest' | |
| env: | |
| CIBW_ARCHS_MACOS: "x86_64 arm64 universal2" | |
| CIBW_BUILD: "cp${{ matrix.pyver }}-*" | |
| uses: pypa/[email protected] | |
| - name: Upload wheels | |
| uses: actions/upload-artifact@v3 | |
| with: | |
| name: dist-artifacts | |
| path: ./wheelhouse/*.whl | |
| release: | |
| needs: [build_wheels, build_sdist] | |
| runs-on: ubuntu-latest | |
| # this is not ideal as it doesn't limit to what type of tag | |
| # but it at least seems to work | |
| if: github.event_name == 'push' && startsWith(github.ref, 'refs/tags') | |
| steps: | |
| - name: Stage artifacts | |
| uses: actions/download-artifact@v3 | |
| with: | |
| name: dist-artifacts | |
| path: dist/ | |
| - name: Check artifacts | |
| run: ls -lrt dist/ | |
| - name: Publish a Python distribution to PyPI | |
| uses: pypa/[email protected] | |
| with: | |
| user: __token__ | |
| password: ${{ secrets.PYPI_API_TOKEN }} |