Scripts for Cell-Cell Communication Analysis
A collection of R scripts for analyzing and plotting cell-cell communications in single cell RNA-seq data from brains of autism subjects and controls. The scripts use CellChat software. A total of five R scripts to generate the figures in the paper below, each with a Readme.
Reference: Astorkia M, Lachman HM, Zheng D. (2022) Characterization of cell-cell communication in autistic brains with single-cell transcriptomes. J Neurodev Disord. 2022 May 2;14(1):29. doi: 10.1186/s11689-022-09441-1.