-
Notifications
You must be signed in to change notification settings - Fork 0
Commit
This commit does not belong to any branch on this repository, and may belong to a fork outside of the repository.
Deploying to gh-pages from @ 87334b5 🚀
- Loading branch information
1 parent
13b39ae
commit e397ab7
Showing
52 changed files
with
6,673 additions
and
0 deletions.
There are no files selected for viewing
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Original file line number | Diff line number | Diff line change |
---|---|---|
@@ -0,0 +1,4 @@ | ||
# Sphinx build info version 1 | ||
# This file hashes the configuration used when building these files. When it is not found, a full rebuild will be done. | ||
config: ee1706def11a0152024844a698af8a00 | ||
tags: 645f666f9bcd5a90fca523b33c5a78b7 |
Binary file not shown.
Binary file not shown.
Binary file not shown.
Binary file not shown.
Binary file not shown.
Binary file not shown.
Large diffs are not rendered by default.
Oops, something went wrong.
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Original file line number | Diff line number | Diff line change |
---|---|---|
@@ -0,0 +1,281 @@ | ||
<!doctype html> | ||
<html class="no-js" lang="en" data-content_root="../../"> | ||
<head><meta charset="utf-8"/> | ||
<meta name="viewport" content="width=device-width,initial-scale=1"/> | ||
<meta name="color-scheme" content="light dark"><link rel="index" title="Index" href="../../genindex.html" /><link rel="search" title="Search" href="../../search.html" /> | ||
|
||
<!-- Generated with Sphinx 7.2.2 and Furo 2023.08.19 --> | ||
<title>bioio_nd2.reader_metadata - bioio-nd2 0.1.dev1+g87334b5 documentation</title> | ||
<link rel="stylesheet" type="text/css" href="../../_static/pygments.css?v=fa44fd50" /> | ||
<link rel="stylesheet" type="text/css" href="../../_static/styles/furo.css?v=135e06be" /> | ||
<link rel="stylesheet" type="text/css" href="../../_static/copybutton.css?v=76b2166b" /> | ||
<link rel="stylesheet" type="text/css" href="../../_static/styles/furo-extensions.css?v=36a5483c" /> | ||
|
||
|
||
|
||
|
||
<style> | ||
body { | ||
--color-code-background: #eeffcc; | ||
--color-code-foreground: black; | ||
|
||
} | ||
@media not print { | ||
body[data-theme="dark"] { | ||
--color-code-background: #202020; | ||
--color-code-foreground: #d0d0d0; | ||
|
||
} | ||
@media (prefers-color-scheme: dark) { | ||
body:not([data-theme="light"]) { | ||
--color-code-background: #202020; | ||
--color-code-foreground: #d0d0d0; | ||
|
||
} | ||
} | ||
} | ||
</style></head> | ||
<body> | ||
|
||
<script> | ||
document.body.dataset.theme = localStorage.getItem("theme") || "auto"; | ||
</script> | ||
|
||
|
||
<svg xmlns="http://www.w3.org/2000/svg" style="display: none;"> | ||
<symbol id="svg-toc" viewBox="0 0 24 24"> | ||
<title>Contents</title> | ||
<svg stroke="currentColor" fill="currentColor" stroke-width="0" viewBox="0 0 1024 1024"> | ||
<path d="M408 442h480c4.4 0 8-3.6 8-8v-56c0-4.4-3.6-8-8-8H408c-4.4 0-8 3.6-8 8v56c0 4.4 3.6 8 8 8zm-8 204c0 4.4 3.6 8 8 8h480c4.4 0 8-3.6 8-8v-56c0-4.4-3.6-8-8-8H408c-4.4 0-8 3.6-8 8v56zm504-486H120c-4.4 0-8 3.6-8 8v56c0 4.4 3.6 8 8 8h784c4.4 0 8-3.6 8-8v-56c0-4.4-3.6-8-8-8zm0 632H120c-4.4 0-8 3.6-8 8v56c0 4.4 3.6 8 8 8h784c4.4 0 8-3.6 8-8v-56c0-4.4-3.6-8-8-8zM115.4 518.9L271.7 642c5.8 4.6 14.4.5 14.4-6.9V388.9c0-7.4-8.5-11.5-14.4-6.9L115.4 505.1a8.74 8.74 0 0 0 0 13.8z"/> | ||
</svg> | ||
</symbol> | ||
<symbol id="svg-menu" viewBox="0 0 24 24"> | ||
<title>Menu</title> | ||
<svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 24 24" fill="none" stroke="currentColor" | ||
stroke-width="2" stroke-linecap="round" stroke-linejoin="round" class="feather-menu"> | ||
<line x1="3" y1="12" x2="21" y2="12"></line> | ||
<line x1="3" y1="6" x2="21" y2="6"></line> | ||
<line x1="3" y1="18" x2="21" y2="18"></line> | ||
</svg> | ||
</symbol> | ||
<symbol id="svg-arrow-right" viewBox="0 0 24 24"> | ||
<title>Expand</title> | ||
<svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 24 24" fill="none" stroke="currentColor" | ||
stroke-width="2" stroke-linecap="round" stroke-linejoin="round" class="feather-chevron-right"> | ||
<polyline points="9 18 15 12 9 6"></polyline> | ||
</svg> | ||
</symbol> | ||
<symbol id="svg-sun" viewBox="0 0 24 24"> | ||
<title>Light mode</title> | ||
<svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 24 24" fill="none" stroke="currentColor" | ||
stroke-width="1.5" stroke-linecap="round" stroke-linejoin="round" class="feather-sun"> | ||
<circle cx="12" cy="12" r="5"></circle> | ||
<line x1="12" y1="1" x2="12" y2="3"></line> | ||
<line x1="12" y1="21" x2="12" y2="23"></line> | ||
<line x1="4.22" y1="4.22" x2="5.64" y2="5.64"></line> | ||
<line x1="18.36" y1="18.36" x2="19.78" y2="19.78"></line> | ||
<line x1="1" y1="12" x2="3" y2="12"></line> | ||
<line x1="21" y1="12" x2="23" y2="12"></line> | ||
<line x1="4.22" y1="19.78" x2="5.64" y2="18.36"></line> | ||
<line x1="18.36" y1="5.64" x2="19.78" y2="4.22"></line> | ||
</svg> | ||
</symbol> | ||
<symbol id="svg-moon" viewBox="0 0 24 24"> | ||
<title>Dark mode</title> | ||
<svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 24 24" fill="none" stroke="currentColor" | ||
stroke-width="1.5" stroke-linecap="round" stroke-linejoin="round" class="icon-tabler-moon"> | ||
<path stroke="none" d="M0 0h24v24H0z" fill="none" /> | ||
<path d="M12 3c.132 0 .263 0 .393 0a7.5 7.5 0 0 0 7.92 12.446a9 9 0 1 1 -8.313 -12.454z" /> | ||
</svg> | ||
</symbol> | ||
<symbol id="svg-sun-half" viewBox="0 0 24 24"> | ||
<title>Auto light/dark mode</title> | ||
<svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 24 24" fill="none" stroke="currentColor" | ||
stroke-width="1.5" stroke-linecap="round" stroke-linejoin="round" class="icon-tabler-shadow"> | ||
<path stroke="none" d="M0 0h24v24H0z" fill="none"/> | ||
<circle cx="12" cy="12" r="9" /> | ||
<path d="M13 12h5" /> | ||
<path d="M13 15h4" /> | ||
<path d="M13 18h1" /> | ||
<path d="M13 9h4" /> | ||
<path d="M13 6h1" /> | ||
</svg> | ||
</symbol> | ||
</svg> | ||
|
||
<input type="checkbox" class="sidebar-toggle" name="__navigation" id="__navigation"> | ||
<input type="checkbox" class="sidebar-toggle" name="__toc" id="__toc"> | ||
<label class="overlay sidebar-overlay" for="__navigation"> | ||
<div class="visually-hidden">Hide navigation sidebar</div> | ||
</label> | ||
<label class="overlay toc-overlay" for="__toc"> | ||
<div class="visually-hidden">Hide table of contents sidebar</div> | ||
</label> | ||
|
||
|
||
|
||
<div class="page"> | ||
<header class="mobile-header"> | ||
<div class="header-left"> | ||
<label class="nav-overlay-icon" for="__navigation"> | ||
<div class="visually-hidden">Toggle site navigation sidebar</div> | ||
<i class="icon"><svg><use href="#svg-menu"></use></svg></i> | ||
</label> | ||
</div> | ||
<div class="header-center"> | ||
<a href="../../index.html"><div class="brand">bioio-nd2 0.1.dev1+g87334b5 documentation</div></a> | ||
</div> | ||
<div class="header-right"> | ||
<div class="theme-toggle-container theme-toggle-header"> | ||
<button class="theme-toggle"> | ||
<div class="visually-hidden">Toggle Light / Dark / Auto color theme</div> | ||
<svg class="theme-icon-when-auto"><use href="#svg-sun-half"></use></svg> | ||
<svg class="theme-icon-when-dark"><use href="#svg-moon"></use></svg> | ||
<svg class="theme-icon-when-light"><use href="#svg-sun"></use></svg> | ||
</button> | ||
</div> | ||
<label class="toc-overlay-icon toc-header-icon no-toc" for="__toc"> | ||
<div class="visually-hidden">Toggle table of contents sidebar</div> | ||
<i class="icon"><svg><use href="#svg-toc"></use></svg></i> | ||
</label> | ||
</div> | ||
</header> | ||
<aside class="sidebar-drawer"> | ||
<div class="sidebar-container"> | ||
|
||
<div class="sidebar-sticky"><a class="sidebar-brand" href="../../index.html"> | ||
|
||
|
||
<span class="sidebar-brand-text">bioio-nd2 0.1.dev1+g87334b5 documentation</span> | ||
|
||
</a><form class="sidebar-search-container" method="get" action="../../search.html" role="search"> | ||
<input class="sidebar-search" placeholder="Search" name="q" aria-label="Search"> | ||
<input type="hidden" name="check_keywords" value="yes"> | ||
<input type="hidden" name="area" value="default"> | ||
</form> | ||
<div id="searchbox"></div><div class="sidebar-scroll"><div class="sidebar-tree"> | ||
<p class="caption" role="heading"><span class="caption-text">Contents:</span></p> | ||
<ul> | ||
<li class="toctree-l1"><a class="reference internal" href="../../index.html">Overview</a></li> | ||
<li class="toctree-l1"><a class="reference internal" href="../../installation.html">Installation</a></li> | ||
<li class="toctree-l1 has-children"><a class="reference internal" href="../../modules.html">Package modules</a><input class="toctree-checkbox" id="toctree-checkbox-1" name="toctree-checkbox-1" role="switch" type="checkbox"/><label for="toctree-checkbox-1"><div class="visually-hidden">Toggle navigation of Package modules</div><i class="icon"><svg><use href="#svg-arrow-right"></use></svg></i></label><ul> | ||
<li class="toctree-l2"><a class="reference internal" href="../../bioio_nd2.html">bioio_nd2 package</a></li> | ||
</ul> | ||
</li> | ||
<li class="toctree-l1"><a class="reference internal" href="../../contributing.html">Contributing</a></li> | ||
</ul> | ||
|
||
</div> | ||
</div> | ||
|
||
</div> | ||
|
||
</div> | ||
</aside> | ||
<div class="main"> | ||
<div class="content"> | ||
<div class="article-container"> | ||
<a href="#" class="back-to-top muted-link"> | ||
<svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 24 24"> | ||
<path d="M13 20h-2V8l-5.5 5.5-1.42-1.42L12 4.16l7.92 7.92-1.42 1.42L13 8v12z"></path> | ||
</svg> | ||
<span>Back to top</span> | ||
</a> | ||
<div class="content-icon-container"> | ||
<div class="theme-toggle-container theme-toggle-content"> | ||
<button class="theme-toggle"> | ||
<div class="visually-hidden">Toggle Light / Dark / Auto color theme</div> | ||
<svg class="theme-icon-when-auto"><use href="#svg-sun-half"></use></svg> | ||
<svg class="theme-icon-when-dark"><use href="#svg-moon"></use></svg> | ||
<svg class="theme-icon-when-light"><use href="#svg-sun"></use></svg> | ||
</button> | ||
</div> | ||
<label class="toc-overlay-icon toc-content-icon no-toc" for="__toc"> | ||
<div class="visually-hidden">Toggle table of contents sidebar</div> | ||
<i class="icon"><svg><use href="#svg-toc"></use></svg></i> | ||
</label> | ||
</div> | ||
<article role="main"> | ||
<h1>Source code for bioio_nd2.reader_metadata</h1><div class="highlight"><pre> | ||
<span></span><span class="ch">#!/usr/bin/env python</span> | ||
<span class="c1"># -*- coding: utf-8 -*-</span> | ||
|
||
<span class="kn">from</span> <span class="nn">typing</span> <span class="kn">import</span> <span class="n">List</span> | ||
|
||
<span class="kn">import</span> <span class="nn">bioio_base.reader_metadata</span> | ||
|
||
<span class="c1">###############################################################################</span> | ||
|
||
|
||
<div class="viewcode-block" id="ReaderMetadata"> | ||
<a class="viewcode-back" href="../../bioio_nd2.html#bioio_nd2.reader_metadata.ReaderMetadata">[docs]</a> | ||
<span class="k">class</span> <span class="nc">ReaderMetadata</span><span class="p">(</span><span class="n">bioio_base</span><span class="o">.</span><span class="n">reader_metadata</span><span class="o">.</span><span class="n">ReaderMetadata</span><span class="p">):</span> | ||
<span class="w"> </span><span class="sd">"""</span> | ||
<span class="sd"> Notes</span> | ||
<span class="sd"> -----</span> | ||
<span class="sd"> Defines metadata for the reader itself (not the image read),</span> | ||
<span class="sd"> such as supported file extensions.</span> | ||
<span class="sd"> """</span> | ||
|
||
<div class="viewcode-block" id="ReaderMetadata.get_supported_extensions"> | ||
<a class="viewcode-back" href="../../bioio_nd2.html#bioio_nd2.reader_metadata.ReaderMetadata.get_supported_extensions">[docs]</a> | ||
<span class="nd">@staticmethod</span> | ||
<span class="k">def</span> <span class="nf">get_supported_extensions</span><span class="p">()</span> <span class="o">-></span> <span class="n">List</span><span class="p">[</span><span class="nb">str</span><span class="p">]:</span> | ||
<span class="w"> </span><span class="sd">"""</span> | ||
<span class="sd"> Return a list of file extensions this plugin supports reading.</span> | ||
<span class="sd"> """</span> | ||
<span class="k">return</span> <span class="p">[</span><span class="s2">".nd2"</span><span class="p">]</span></div> | ||
|
||
|
||
<div class="viewcode-block" id="ReaderMetadata.get_reader"> | ||
<a class="viewcode-back" href="../../bioio_nd2.html#bioio_nd2.reader_metadata.ReaderMetadata.get_reader">[docs]</a> | ||
<span class="nd">@staticmethod</span> | ||
<span class="k">def</span> <span class="nf">get_reader</span><span class="p">()</span> <span class="o">-></span> <span class="n">bioio_base</span><span class="o">.</span><span class="n">reader</span><span class="o">.</span><span class="n">Reader</span><span class="p">:</span> | ||
<span class="w"> </span><span class="sd">"""</span> | ||
<span class="sd"> Return the reader this plugin represents</span> | ||
<span class="sd"> """</span> | ||
<span class="kn">from</span> <span class="nn">.reader</span> <span class="kn">import</span> <span class="n">Reader</span> | ||
|
||
<span class="k">return</span> <span class="n">Reader</span></div> | ||
</div> | ||
|
||
</pre></div> | ||
</article> | ||
</div> | ||
<footer> | ||
|
||
<div class="related-pages"> | ||
|
||
|
||
</div> | ||
<div class="bottom-of-page"> | ||
<div class="left-details"> | ||
<div class="copyright"> | ||
Copyright © 2023 | ||
</div> | ||
Made with <a href="https://www.sphinx-doc.org/">Sphinx</a> and <a class="muted-link" href="https://pradyunsg.me">@pradyunsg</a>'s | ||
|
||
<a href="https://github.com/pradyunsg/furo">Furo</a> | ||
|
||
</div> | ||
<div class="right-details"> | ||
|
||
</div> | ||
</div> | ||
|
||
</footer> | ||
</div> | ||
<aside class="toc-drawer no-toc"> | ||
|
||
|
||
|
||
</aside> | ||
</div> | ||
</div><script src="../../_static/documentation_options.js?v=30e89f9d"></script> | ||
<script src="../../_static/doctools.js?v=888ff710"></script> | ||
<script src="../../_static/sphinx_highlight.js?v=dc90522c"></script> | ||
<script src="../../_static/scripts/furo.js?v=32e29ea5"></script> | ||
<script src="../../_static/clipboard.min.js?v=a7894cd8"></script> | ||
<script src="../../_static/copybutton.js?v=30646c52"></script> | ||
</body> | ||
</html> |
Oops, something went wrong.