Update to 1.0 and add mention of quaqcr

bjmt · Jun 10, 2024 · 0c4c923 · 0c4c923
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diff --git a/README.md b/README.md
@@ -43,6 +43,14 @@ report [here](./test/reads.quaqc.txt).
 Note that quaqc can also save the final reads passing all filters to a new BAM
 file via the `-S/--keep` flag. (This will increase the runtime.)
 
+## quaqcr
+
+For those who prefer to analyze their data with R, a companion package
+[`quaqcr`](https://github.com/bjmt/quaqcr) is available. This package contains
+functions for both executing quaqc from within R as well as analyzing all of
+its outputs made available when outputting the results in JSON format. See
+the README for a detailed tutorial.
+
 ## Help
 
 Please open an [issue](https://github.com/bjmt/quaqc/issues) on GitHub.

diff --git a/src/quaqc.h b/src/quaqc.h
@@ -25,7 +25,7 @@
 #include <time.h>
 #include "htslib/hts.h"
 
-#define QUAQC_VERSION  "0.1"
+#define QUAQC_VERSION  "1.0"
 #define QUAQC_YEAR    "2024"
 
 // Command line defaults ------------------------------------------------------------