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more Mt/Pt default names
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bjmt committed Mar 18, 2024
1 parent 686e454 commit 1998d79
Showing 1 changed file with 2 additions and 2 deletions.
4 changes: 2 additions & 2 deletions src/quaqc.h
Original file line number Diff line number Diff line change
Expand Up @@ -43,8 +43,8 @@
#define DEFAULT_OUT_EXT ".quaqc.txt"
#define DEFAULT_BAM_EXT ".filt.bam"

#define DEFAULT_MITO "chrM,ChrM,Mt,mitochondria"
#define DEFAULT_PLTD "chrC,ChrC,Pt,chloroplast"
#define DEFAULT_MITO "chrM,ChrM,Mt,MT,MtDNA,mit,Mito,mitochondria,mitochondrion"
#define DEFAULT_PLTD "chrC,ChrC,Pt,PT,Pltd,Chloro,chloroplast"

// Functions, macros ------------------------------------------------------------

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