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Merge imio in as image_io submodule #33

Merged
merged 89 commits into from
Feb 9, 2024
Merged

Merge imio in as image_io submodule #33

merged 89 commits into from
Feb 9, 2024

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willGraham01
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@willGraham01 willGraham01 commented Feb 9, 2024 •
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As per brainglobe/BrainGlobe#64

imio will be fully migrated into this package, and renamed to brainglobe_utils.image_io.
Otherwise, interaction with the package will be otherwise unchanged.

Upon merging: release version 0.4.0!

crousseau and others added 30 commits October 1, 2021 12:32
@crousseau
Initial commit
e014c7b
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bump
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bump
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bump
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add bump2version
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@adamltyson
Bump version: 0.0.2 → 0.0.3
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add pre commit hooks
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update testing
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@adamltyson
reorder ci
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@adamltyson
fix non-istropic loading error
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@adamltyson
Bump version: 0.0.3 → 0.0.4
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@adamltyson
Gh actions (#3)
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* add gh actions

* Update testing

* update testing

* add lint

* coveralls

* coveralls

* deploy

* Bump version: 0.0.4 → 0.0.5

* update readme
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transfer to brainglobe
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run tests on PR
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update coverage
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support python 3.9
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@adamltyson
Bump version: 0.0.5 → 0.0.6
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update bump2version
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@adamltyson
Bump version: 0.0.6 → 0.1.0-rc0
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Bump version: 0.1.0-rc0 → 0.1.0
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Update setup.py
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add missing import
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Update README.md
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fix linting
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@jaimergp
Exclude tests from packaged distributions (#6)
951411e
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Update pre commit
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reformat
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Python 3.10 compatibility
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Bump version: 0.1.0 → 0.2.0-rc0
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update GH actions
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pre-commit-ci bot and others added 21 commits July 11, 2023 07:21
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[pre-commit.ci] pre-commit autoupdate (#34)
b7b3198 
updates:
- [github.com/astral-sh/ruff-pre-commit: v0.0.276 → v0.0.277](astral-sh/ruff-pre-commit@v0.0.276...v0.0.277)

Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>
@willGraham01
Update CI workflow to use NIU actions (#35)
e0e5f34
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[pre-commit.ci] pre-commit autoupdate (#36)
0f86998 
updates:
- [github.com/astral-sh/ruff-pre-commit: v0.0.277 → v0.0.278](astral-sh/ruff-pre-commit@v0.0.277...v0.0.278)
- [github.com/psf/black: 23.3.0 → 23.7.0](psf/black@23.3.0...23.7.0)

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@pre-commit-ci
[pre-commit.ci] pre-commit autoupdate (#37)
a629b28 
updates:
- [github.com/astral-sh/ruff-pre-commit: v0.0.278 → v0.0.280](astral-sh/ruff-pre-commit@v0.0.278...v0.0.280)

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[pre-commit.ci] pre-commit autoupdate (#38)
6c28c9c 
updates:
- [github.com/astral-sh/ruff-pre-commit: v0.0.280 → v0.0.281](astral-sh/ruff-pre-commit@v0.0.280...v0.0.281)

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@pre-commit-ci
[pre-commit.ci] pre-commit autoupdate (#39)
cebc28e 
updates:
- [github.com/astral-sh/ruff-pre-commit: v0.0.281 → v0.0.282](astral-sh/ruff-pre-commit@v0.0.281...v0.0.282)

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[pre-commit.ci] pre-commit autoupdate (#40)
15d9aeb 
updates:
- [github.com/astral-sh/ruff-pre-commit: v0.0.282 → v0.0.284](astral-sh/ruff-pre-commit@v0.0.282...v0.0.284)
- [github.com/pre-commit/mirrors-mypy: v1.4.1 → v1.5.0](pre-commit/mirrors-mypy@v1.4.1...v1.5.0)

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[pre-commit.ci] pre-commit autoupdate (#41)
b848990 
updates:
- [github.com/astral-sh/ruff-pre-commit: v0.0.284 → v0.0.285](astral-sh/ruff-pre-commit@v0.0.284...v0.0.285)
- [github.com/pre-commit/mirrors-mypy: v1.5.0 → v1.5.1](pre-commit/mirrors-mypy@v1.5.0...v1.5.1)

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[pre-commit.ci] pre-commit autoupdate (#42)
c94cad2 
updates:
- [github.com/astral-sh/ruff-pre-commit: v0.0.285 → v0.0.286](astral-sh/ruff-pre-commit@v0.0.285...v0.0.286)

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Set pre-commit autoupdate frequency to monthly (#43)
43a71ca
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[pre-commit.ci] pre-commit autoupdate (#44)
bed58d4 
updates:
- [github.com/astral-sh/ruff-pre-commit: v0.0.286 → v0.0.287](astral-sh/ruff-pre-commit@v0.0.286...v0.0.287)

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[pre-commit.ci] pre-commit autoupdate (#45)
7a763f0 
updates:
- [github.com/astral-sh/ruff-pre-commit: v0.0.287 → v0.0.292](astral-sh/ruff-pre-commit@v0.0.287...v0.0.292)
- [github.com/psf/black: 23.7.0 → 23.9.1](psf/black@23.7.0...23.9.1)

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[pre-commit.ci] pre-commit autoupdate (#48)
877d979 
updates:
- [github.com/pre-commit/pre-commit-hooks: v4.4.0 → v4.5.0](pre-commit/pre-commit-hooks@v4.4.0...v4.5.0)
- [github.com/astral-sh/ruff-pre-commit: v0.0.292 → v0.1.4](astral-sh/ruff-pre-commit@v0.0.292...v0.1.4)
- [github.com/psf/black: 23.9.1 → 23.10.1](psf/black@23.9.1...23.10.1)
- [github.com/pre-commit/mirrors-mypy: v1.5.1 → v1.6.1](pre-commit/mirrors-mypy@v1.5.1...v1.6.1)

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[pre-commit.ci] pre-commit autoupdate (#49)
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updates:
- [github.com/astral-sh/ruff-pre-commit: v0.1.4 → v0.1.6](astral-sh/ruff-pre-commit@v0.1.4...v0.1.6)
- [github.com/psf/black: 23.10.1 → 23.11.0](psf/black@23.10.1...23.11.0)
- [github.com/pre-commit/mirrors-mypy: v1.6.1 → v1.7.1](pre-commit/mirrors-mypy@v1.6.1...v1.7.1)

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[pre-commit.ci] pre-commit autoupdate (#50)
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updates:
- [github.com/astral-sh/ruff-pre-commit: v0.1.6 → v0.1.9](astral-sh/ruff-pre-commit@v0.1.6...v0.1.9)
- [github.com/psf/black: 23.11.0 → 23.12.1](psf/black@23.11.0...23.12.1)
- [github.com/pre-commit/mirrors-mypy: v1.7.1 → v1.8.0](pre-commit/mirrors-mypy@v1.7.1...v1.8.0)

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Update GH actions badge (#51)
176e871
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Update test_and_deploy.yml (#52)
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See neuroinformatics-unit/movement#108

Co-authored-by: Igor Tatarnikov <[email protected]>
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Add manifest (#54)
712fc00 
* Update CI workflows with manifest

* Allow workflow to be dispatchable

* Add pyarrow dependency to prevent future pandas failures
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[pre-commit.ci] pre-commit autoupdate (#53)
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updates:
- [github.com/astral-sh/ruff-pre-commit: v0.1.9 → v0.2.0](astral-sh/ruff-pre-commit@v0.1.9...v0.2.0)
- [github.com/psf/black: 23.12.1 → 24.1.1](psf/black@23.12.1...24.1.1)

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@willGraham01
Merge remote-tracking branch 'imio/main' into merge-imio-in
d8dc67b
@willGraham01
refactor image_io as submodule
f699d8a
@willGraham01 willGraham01 mentioned this pull request Feb 9, 2024
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@willGraham01 willGraham01 requested a review from a team February 9, 2024 11:51
@adamltyson adamltyson merged commit 5a2a2d6 into main Feb 9, 2024
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@adamltyson adamltyson deleted the merge-imio-in branch February 9, 2024 15:28
@alessandrofelder alessandrofelder mentioned this pull request Feb 29, 2024
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