Updates for OO transformations and surrogate functions (#519) #451

Workflow file for this run

	# This workflow will install Python dependencies, run tests and lint with a variety of Python versions
	# For more information see: https://help.github.com/actions/language-and-framework-guides/using-python-with-github-actions

	name: Continuous Integration

	on:
	push:
	branches:
	- '**' # matches every branch
	pull_request:
	branches:
	- '**' # matches every branch

	#on:
	# push:
	# branches: [ master ]
	# pull_request:
	# branches: [ master ]


	jobs:
	test_linux:
	runs-on: ubuntu-latest
	strategy:
	fail-fast: false
	matrix:
	python-version: [ "3.9", "3.10", "3.11"]

	steps:
	- uses: actions/checkout@v4
	- name: Set up Python ${{ matrix.python-version }}
	uses: actions/setup-python@v4
	with:
	python-version: ${{ matrix.python-version }}
	- name: Install dependencies
	run: \|
	python -m pip install --upgrade pip
	python -m pip install flake8 pytest
	if [ -f requirements-dev.txt ]; then pip install -r requirements-dev.txt; fi
	pip uninstall brainpy -y
	python setup.py install
	- name: Lint with flake8
	run: \|
	# stop the build if there are Python syntax errors or undefined names
	flake8 brainpy/ --count --select=E9,F63,F7,F82 --show-source --statistics
	# exit-zero treats all errors as warnings. The GitHub editor is 127 chars wide
	flake8 brainpy/ --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics
	- name: Test with pytest
	run: \|
	cd brainpy
	pytest _src/


	# test_linux_py37:
	# runs-on: ubuntu-latest
	# strategy:
	# fail-fast: false
	# matrix:
	# python-version: ["3.7"]
	#
	# steps:
	# - uses: actions/checkout@v4
	# - name: Set up Python ${{ matrix.python-version }}
	# uses: actions/setup-python@v4
	# with:
	# python-version: ${{ matrix.python-version }}
	# - name: Install dependencies
	# run: \|
	# python -m pip install --upgrade pip
	# python -m pip install flake8 pytest
	# if [ -f requirements-dev.txt ]; then pip install -r requirements-dev.txt; fi
	# pip install jax==0.3.25
	# pip install jaxlib==0.3.25
	# pip uninstall brainpy -y
	# python setup.py install
	# - name: Lint with flake8
	# run: \|
	# # stop the build if there are Python syntax errors or undefined names
	# flake8 brainpy/ --count --select=E9,F63,F7,F82 --show-source --statistics
	# # exit-zero treats all errors as warnings. The GitHub editor is 127 chars wide
	# flake8 brainpy/ --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics
	# - name: Test with pytest
	# run: \|
	# cd examples
	# pytest ../brainpy/
	#

	test_macos:
	runs-on: macos-latest
	strategy:
	fail-fast: false
	matrix:
	python-version: ["3.9", "3.10", "3.11"]

	steps:
	- uses: actions/checkout@v4
	- name: Set up Python ${{ matrix.python-version }}
	uses: actions/setup-python@v4
	with:
	python-version: ${{ matrix.python-version }}
	- name: Install dependencies
	run: \|
	python -m pip install --upgrade pip
	python -m pip install flake8 pytest
	if [ -f requirements-dev.txt ]; then pip install -r requirements-dev.txt; fi
	pip uninstall brainpy -y
	python setup.py install
	- name: Lint with flake8
	run: \|
	# stop the build if there are Python syntax errors or undefined names
	flake8 brainpy/ --count --select=E9,F63,F7,F82 --show-source --statistics
	# exit-zero treats all errors as warnings. The GitHub editor is 127 chars wide
	flake8 brainpy/ --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics
	- name: Test with pytest
	run: \|
	cd brainpy
	pytest _src/

	# test_macos_py37:
	# runs-on: macos-latest
	# strategy:
	# fail-fast: false
	# matrix:
	# python-version: [ "3.7" ]
	#
	# steps:
	# - uses: actions/checkout@v4
	# - name: Set up Python ${{ matrix.python-version }}
	# uses: actions/setup-python@v4
	# with:
	# python-version: ${{ matrix.python-version }}
	# - name: Install dependencies
	# run: \|
	# python -m pip install --upgrade pip
	# python -m pip install flake8 pytest
	# if [ -f requirements-dev.txt ]; then pip install -r requirements-dev.txt; fi
	# pip install jax==0.3.25
	# pip install jaxlib==0.3.25
	# pip uninstall brainpy -y
	# python setup.py install
	# - name: Lint with flake8
	# run: \|
	# # stop the build if there are Python syntax errors or undefined names
	# flake8 brainpy/ --count --select=E9,F63,F7,F82 --show-source --statistics
	# # exit-zero treats all errors as warnings. The GitHub editor is 127 chars wide
	# flake8 brainpy/ --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics
	# - name: Test with pytest
	# run: \|
	# cd examples
	# pytest ../brainpy/
	#


	# test_windows:
	# runs-on: windows-latest
	# strategy:
	# fail-fast: false
	# matrix:
	# python-version: ["3.8", "3.9", "3.10", "3.11"]
	#
	# steps:
	# - uses: actions/checkout@v4
	# - name: Set up Python ${{ matrix.python-version }}
	# uses: actions/setup-python@v4
	# with:
	# python-version: ${{ matrix.python-version }}
	# - name: Install dependencies
	# run: \|
	# python -m pip install --upgrade pip
	# python -m pip install flake8 pytest
	# python -m pip install numpy>=1.21.0
	# python -m pip install "jaxlib==0.4.11" -f https://whls.blob.core.windows.net/unstable/index.html --use-deprecated legacy-resolver
	# python -m pip install jax==0.4.11
	# python -m pip install -r requirements-dev.txt
	# python -m pip install tqdm brainpylib
	# pip uninstall brainpy -y
	# python setup.py install
	# - name: Lint with flake8
	# run: \|
	# # stop the build if there are Python syntax errors or undefined names
	# flake8 brainpy/ --count --select=E9,F63,F7,F82 --show-source --statistics
	# # exit-zero treats all errors as warnings. The GitHub editor is 127 chars wide
	# flake8 brainpy/ --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics
	# - name: Test with pytest
	# run: \|
	# cd brainpy
	# pytest _src/


	# test_windows_py37:
	# runs-on: windows-latest
	# strategy:
	# fail-fast: false
	# matrix:
	# python-version: ["3.7"]
	#
	# steps:
	# - uses: actions/checkout@v4
	# - name: Set up Python ${{ matrix.python-version }}
	# uses: actions/setup-python@v4
	# with:
	# python-version: ${{ matrix.python-version }}
	# - name: Install dependencies
	# run: \|
	# python -m pip install --upgrade pip
	# python -m pip install flake8 pytest
	# python -m pip install numpy>=1.21.0
	# python -m pip install "jaxlib==0.3.25" -f https://whls.blob.core.windows.net/unstable/index.html --use-deprecated legacy-resolver
	# python -m pip install https://github.com/google/jax/archive/refs/tags/jax-v0.3.25.tar.gz
	# python -m pip install -r requirements-dev.txt
	# python -m pip install tqdm brainpylib
	# pip uninstall brainpy -y
	# python setup.py install
	# - name: Lint with flake8
	# run: \|
	# # stop the build if there are Python syntax errors or undefined names
	# flake8 brainpy/ --count --select=E9,F63,F7,F82 --show-source --statistics
	# # exit-zero treats all errors as warnings. The GitHub editor is 127 chars wide
	# flake8 brainpy/ --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics
	# - name: Test with pytest
	# run: \|
	# cd examples
	# pytest ../brainpy/

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Updates for OO transformations and surrogate functions (#519) #451

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Updates for OO transformations and surrogate functions (#519) #451

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Workflow file for this run