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Merge pull request #49 from broadinstitute/pops
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update POPS
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klaricch authored Apr 10, 2024
2 parents baeb052 + 9dfac5e commit a8e5783
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion gnomad_mitochondria/utils/annotations.py
Original file line number Diff line number Diff line change
Expand Up @@ -19,7 +19,7 @@
logger.setLevel(logging.INFO)

# Use populations from gnomAD v3
POPS = POPS["v3"] # pylint: disable=invalid-sequence-index
POPS = POPS["v3"]["genomes"] # pylint: disable=invalid-sequence-index

# Include NA in POPS to account for cases where population annotations are missing
POPS.append("NA")
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