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Add functions to pull out worst after aggregation by consequences #656

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@KoalaQin KoalaQin commented Jan 8, 2024

This is an optional function to pull out worst consequences after the tx aggregation, this is more useful in use cases where the aggregation were grouped by consequences, lof and lof_flags in disease studies as done in the pext paper. For gnomAD pext release and browser display, since it's base level aggregation by gene_id, we don't need this function.

@KoalaQin KoalaQin changed the title add functions to pull out worst after aggregation Add functions to pull out worst after aggregation by consequences Jan 8, 2024
@KoalaQin KoalaQin self-assigned this Jan 8, 2024
@KoalaQin KoalaQin requested a review from jkgoodrich January 8, 2024 22:36
@jkgoodrich jkgoodrich deleted the branch qh/tx_annotate_mt January 22, 2024 14:57
@jkgoodrich jkgoodrich closed this Jan 22, 2024
@KoalaQin KoalaQin deleted the qh/pull_worst branch April 3, 2024 13:48
@KoalaQin KoalaQin restored the qh/pull_worst branch April 3, 2024 14:13
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