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Spades produces many short contigs. It may be helpful to have an optional parameter for metagenomics.py::assemble_spades, perhaps --minContigLength, to only write contigs greater in length than a specified value.
The text was updated successfully, but these errors were encountered:
Spades produces many short contigs. It may be helpful to have an optional parameter for
metagenomics.py::assemble_spades
, perhaps--minContigLength
, to only write contigs greater in length than a specified value.The text was updated successfully, but these errors were encountered: