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Np update gatk 4.6.1.0 revert bqsr and validate chip
Test Illumina Genotyping Array #129: Pull request #1405 synchronize by nikellepetrillo
November 4, 2024 19:35 27m 11s np_update_gatk_4.6.1.0_revert_BQSR
November 4, 2024 19:35 27m 11s
Np update gatk 4.6.1.0 revert bqsr and validate chip
Test Illumina Genotyping Array #128: Pull request #1405 synchronize by nikellepetrillo
November 4, 2024 19:34 29m 11s np_update_gatk_4.6.1.0_revert_BQSR
November 4, 2024 19:34 29m 11s
Np update gatk 4.6.1.0 revert bqsr and validate chip
Test Illumina Genotyping Array #127: Pull request #1405 synchronize by nikellepetrillo
November 4, 2024 19:25 26m 11s np_update_gatk_4.6.1.0_revert_BQSR
November 4, 2024 19:25 26m 11s
Np nondeterminism atac lib metrics
Test Illumina Genotyping Array #126: Pull request #1409 synchronize by nikellepetrillo
November 4, 2024 19:24 30m 15s np_nondeterminism_atac_lib_metrics
November 4, 2024 19:24 30m 15s
Np nondeterminism atac lib metrics
Test Illumina Genotyping Array #125: Pull request #1409 synchronize by nikellepetrillo
November 4, 2024 17:57 30m 14s np_nondeterminism_atac_lib_metrics
November 4, 2024 17:57 30m 14s
Np nondeterminism atac lib metrics
Test Illumina Genotyping Array #124: Pull request #1409 synchronize by nikellepetrillo
November 4, 2024 16:30 25m 4s np_nondeterminism_atac_lib_metrics
November 4, 2024 16:30 25m 4s
Fix join barcode step for Opossum
Test Illumina Genotyping Array #123: Pull request #1397 synchronize by khajoue2
November 4, 2024 14:59 27m 13s pd-2747-multiome-opossum
November 4, 2024 14:59 27m 13s
Np nondeterminism atac lib metrics
Test Illumina Genotyping Array #122: Pull request #1409 opened by nikellepetrillo
November 4, 2024 14:48 1h 1m 12s np_nondeterminism_atac_lib_metrics
November 4, 2024 14:48 1h 1m 12s
Fix join barcode step for Opossum
Test Illumina Genotyping Array #121: Pull request #1397 synchronize by khajoue2
November 4, 2024 14:47 28m 16s pd-2747-multiome-opossum
November 4, 2024 14:47 28m 16s
Np update gatk 4.6.1.0 revert bqsr and validate chip
Test Illumina Genotyping Array #120: Pull request #1405 synchronize by nikellepetrillo
November 1, 2024 12:39 27m 7s np_update_gatk_4.6.1.0_revert_BQSR
November 1, 2024 12:39 27m 7s
staging --> master
Test Illumina Genotyping Array #119: Pull request #1408 opened by ekiernan
October 31, 2024 17:02 28m 6s staging
October 31, 2024 17:02 28m 6s
dev --> staging
Test Illumina Genotyping Array #118: Pull request #1407 opened by ekiernan
October 31, 2024 14:28 27m 8s develop
October 31, 2024 14:28 27m 8s
Np update gatk 4.6.1.0 revert bqsr and validate chip
Test Illumina Genotyping Array #117: Pull request #1405 synchronize by nikellepetrillo
October 31, 2024 14:24 28m 10s np_update_gatk_4.6.1.0_revert_BQSR
October 31, 2024 14:24 28m 10s
Np address nondeterminism in atac library metrics
Test Illumina Genotyping Array #116: Pull request #1406 synchronize by nikellepetrillo
October 31, 2024 13:31 29m 9s np_nondeterminism_atac_lib_metrics
October 31, 2024 13:31 29m 9s
Np address nondeterminism in atac library metrics
Test Illumina Genotyping Array #115: Pull request #1406 opened by nikellepetrillo
October 31, 2024 13:30 26m 10s np_nondeterminism_atac_lib_metrics
October 31, 2024 13:30 26m 10s
Np update gatk 4.6.1.0 revert bqsr and validate chip
Test Illumina Genotyping Array #114: Pull request #1405 opened by nikellepetrillo
October 31, 2024 13:19 28m 9s np_update_gatk_4.6.1.0_revert_BQSR
October 31, 2024 13:19 28m 9s
Update to released version of GATK for VCF Comparator in tests
Test Illumina Genotyping Array #113: Pull request #1399 synchronize by nikellepetrillo
October 30, 2024 19:12 28m 14s ms_vcf_comparator
October 30, 2024 19:12 28m 14s
gatk docker update 4.6.1.0
Test Illumina Genotyping Array #112: Pull request #1403 synchronize by meganshand
October 30, 2024 16:05 28m 14s np_update_gatk_4.6.1.0
October 30, 2024 16:05 28m 14s
Lk add bgzip
Test Illumina Genotyping Array #111: Pull request #1404 synchronize by ekiernan
October 30, 2024 15:37 32m 24s lk-add-bgzip
October 30, 2024 15:37 32m 24s
Lk add bgzip
Test Illumina Genotyping Array #110: Pull request #1404 synchronize by ekiernan
October 30, 2024 15:30 29m 20s lk-add-bgzip
October 30, 2024 15:30 29m 20s
Update to released version of GATK for VCF Comparator in tests
Test Illumina Genotyping Array #109: Pull request #1399 synchronize by nikellepetrillo
October 30, 2024 14:23 26m 12s ms_vcf_comparator
October 30, 2024 14:23 26m 12s
Reducing memory required for ValidateVCF in Reblock pipeline
Test Illumina Genotyping Array #108: Pull request #1400 synchronize by nikellepetrillo
October 30, 2024 12:51 27m 10s ms_reblock
October 30, 2024 12:51 27m 10s
Lk add bgzip
Test Illumina Genotyping Array #107: Pull request #1404 synchronize by ekiernan
October 30, 2024 12:33 28m 13s lk-add-bgzip
October 30, 2024 12:33 28m 13s
Lk pd 2786 add atac expectedcells
Test Illumina Genotyping Array #106: Pull request #1398 synchronize by ekiernan
October 29, 2024 14:31 29m 18s lk-PD-2786-Add-ATAC-Expectedcells
October 29, 2024 14:31 29m 18s
Lk pd 2786 add atac expectedcells
Test Illumina Genotyping Array #105: Pull request #1398 synchronize by ekiernan
October 29, 2024 13:44 27m 17s lk-PD-2786-Add-ATAC-Expectedcells
October 29, 2024 13:44 27m 17s
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