cleaning up VerifyNA12878 outputs

broadinstitute · Jul 18, 2024 · 1f38183 · 1f38183
1 parent 577516c
commit 1f38183
Showing 1 changed file with 2 additions and 4 deletions.
diff --git a/verification/VerifyNA12878.wdl b/verification/VerifyNA12878.wdl
@@ -81,10 +81,8 @@ task RunValidation {
 
     output {
         Array[File] concordance_tables = glob("./*.summary.tsv")
-        Array[File] tpfn = glob("./*.tpfn.vcf.gz")
-        Array[File] tpfn_index = glob("./*.tpfn.vcf.gz.tbi")
-        Array[File] tpfp = glob("./*.tpfp.vcf.gz")
-        Array[File] tpfp_index = glob("./*.tpfp.vcf.gz.tbi")
+        Array[File] tpfn = glob("./*.tpfn.vcf.gz*")
+        Array[File] tpfp = glob("./*.tpfp.vcf.gz*")
     }
 
     runtime {