try to hit dockstore

broadinstitute · Dec 12, 2024 · a442e2e · a442e2e
1 parent 3b81958
commit a442e2e
Show file tree

Hide file tree

Showing 2 changed files with 14 additions and 2 deletions.
diff --git a/.github/workflows/test_illumina_genotyping_array.yml b/.github/workflows/test_illumina_genotyping_array.yml
@@ -97,6 +97,7 @@ jobs:
         run: |
           python scripts/dockstore_api/fetch_dockstore_id.py $DOCKSTORE_TOKEN github.com%2Fbroadinstitute%2Fwarp%2FIlluminaGenotypingArray BIOWORKFLOW np_jw_test_illumina_genotyping_arrays
         env:
+          ##TODO NEED TO ADD DOCKSTORE_TOKEN FOR SERVICE ACCOUNT##
           DOCKSTORE_TOKEN: ${{ secrets.DOCKSTORE_TOKEN }}
 
       - name: Set Commit Hash

diff --git a/scripts/dockstore_api/fetch_dockstore_id.py b/scripts/dockstore_api/fetch_dockstore_id.py
@@ -15,8 +15,19 @@ def fetch_workflow_id(token, repository, subclass, version_name):
 
     response = requests.get(url, params=params, headers=headers)
     response.raise_for_status()
-    workflow_data = response.json()
-    print(workflow_data.get("id"))
+    data = response.json()
+
+    # Extract workflow and version IDs
+    workflow_id = data.get("id")
+    version_id = next(
+        (version["id"] for version in data.get("workflowVersions", [])
+         if version["name"] == {version_name}),
+        None
+    )
+
+    print(f"Workflow ID: {workflow_id}")
+    print(f"Version ID: {version_id}")
+
 
 if __name__ == "__main__":
     if len(sys.argv) != 5: