add joint genotyping

broadinstitute · Jan 8, 2025 · e82851e · e82851e
1 parent 7326a84
commit e82851e
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Showing 13 changed files with 421 additions and 49 deletions.
diff --git a/.dockstore.yml b/.dockstore.yml
@@ -131,6 +131,10 @@ workflows:
     subclass: WDL
     primaryDescriptorPath: /verification/test-wdls/TestIlluminaGenotypingArray.wdl
 
+  - name: TestJointGenotyping
+    subclass: WDL
+    primaryDescriptorPath: /verification/test-wdls/TestJointGenotyping.wdl
+
   - name: TestPairedTag
     subclass: WDL
     primaryDescriptorPath: /verification/test-wdls/TestPairedTag.wdl

diff --git a/.github/workflows/test_exome_germline_single_sample.yml b/.github/workflows/test_exome_germline_single_sample.yml
@@ -2,10 +2,6 @@ name: Test ExomeGermlineSingleSample
 
 # Controls when the workflow will run
 on:
-  #run on push to feature branch "kp_GHA_Terra_auth_PD-2682" - REMOVE WHEN DONE TESTING
-  # push:
-  #   branches:
-  #     - kp_GHA_Terra_auth_PD-2682
   pull_request:
     branches: [ "develop", "staging", "master" ]
     # Only run if files in these paths changed:

diff --git a/.github/workflows/test_illumina_genotyping_array.yml b/.github/workflows/test_illumina_genotyping_array.yml
@@ -2,10 +2,6 @@ name: Test Illumina Genotyping Array
 
 # Controls when the workflow will run
 on:
-  #run on push to feature branch "kp_GHA_Terra_auth_PD-2682" - REMOVE WHEN DONE TESTING
-  # push:
-  #   branches:
-  #     - kp_GHA_Terra_auth_PD-2682
   pull_request:
     branches: [ "develop", "staging", "master" ]
     # Only run if files in these paths changed: