Refactored Jupyter File

Replaced diff3_analysis.ipynb with equivalent run_diff3_analysis.py python file.

src/python/run_diff3_analysis.py

@@ -0,0 +1,74 @@
+from diff3_analysis import diff3_analysis
+import os
+
+# Mixed conflict and pass examples from results_greatest_hits/result.csv
+# Randomly chosen sample of mixed results from dataset
+row_nums = [
+    582,
+    427,
+    930,
+    70,
+    128,
+    1444,
+    1177,
+    849,
+    1425,
+    1642,
+    1897,
+    862,
+    943,
+    1442,
+    1120,
+    111,
+    693,
+    535,
+    354,
+    530,
+    845,
+    654,
+    921,
+    464,
+    1006,
+    707,
+    485,
+    1928,
+    809,
+    1329,
+    65,
+    1890,
+    100,
+    247,
+    2038,
+    900,
+]
+
+# All merge tools
+merge_tools = [
+    "gitmerge_ort",
+    "gitmerge_ort_adjacent",
+    "gitmerge_ort_ignorespace",
+    "gitmerge_ort_imports",
+    "gitmerge_ort_imports_ignorespace",
+    "gitmerge_resolve",
+    "gitmerge_recursive_histogram",
+    "gitmerge_recursive_ignorespace",
+    "gitmerge_recursive_minimal",
+    "gitmerge_recursive_myers",
+    "gitmerge_recursive_patience",
+    "git_hires_merge",
+    "spork",
+    "intellimerge",
+]
+
+
+def run_analysis():
+    # Ensure the base output directory exists
+    base_output_dir = "./merge_conflict_analysis_diffs"
+
+    # Loop through each conflict, recreating merges to repo_output_dir
+    for row_num in row_nums:
+        for merge_tool in merge_tools:
+            # Create a subdirectory for this specific results_index
+            repo_output_dir = os.path.join(base_output_dir, str(row_num), merge_tool)
+            os.makedirs(repo_output_dir, exist_ok=True)
+            diff3_analysis(merge_tool, row_num, repo_output_dir)