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update mondo
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korikuzma committed Jan 22, 2025
1 parent 44382df commit 7ea165d
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Showing 2 changed files with 4 additions and 4 deletions.
4 changes: 2 additions & 2 deletions src/disease/schemas.py
Original file line number Diff line number Diff line change
Expand Up @@ -76,7 +76,7 @@ class NamespacePrefix(Enum):
NAMESPACE_TO_SYSTEM_URI: MappingProxyType[NamespacePrefix, str] = MappingProxyType(
{
NamespacePrefix.NCIT: "https://ncit.nci.nih.gov/ncitbrowser/ConceptReport.jsp?dictionary=NCI_Thesaurus&code=",
NamespacePrefix.MONDO: "http://purl.obolibrary.org/obo/mondo.owl",
NamespacePrefix.MONDO: "https://monarchinitiative.org/",
NamespacePrefix.DO: "https://disease-ontology.org/?id=",
NamespacePrefix.DOID: "https://disease-ontology.org/?id=",
NamespacePrefix.OMIM: "https://omim.org/",
Expand Down Expand Up @@ -300,7 +300,7 @@ class NormalizationService(BaseModel):
"coding": {
"id": "mondo:0004355",
"code": "MONDO:0004355",
"system": "http://purl.obolibrary.org/obo/mondo.owl",
"system": "https://monarchinitiative.org/",
},
"relation": "relatedMatch",
},
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4 changes: 2 additions & 2 deletions tests/unit/test_query.py
Original file line number Diff line number Diff line change
Expand Up @@ -36,7 +36,7 @@ def neuroblastoma():
"coding": {
"id": "mondo:0005072",
"code": "MONDO:0005072",
"system": "http://purl.obolibrary.org/obo/mondo.owl",
"system": "https://monarchinitiative.org/",
},
"relation": "relatedMatch",
},
Expand Down Expand Up @@ -180,7 +180,7 @@ def mafd2():
"coding": {
"id": "mondo:0010648",
"code": "MONDO:0010648",
"system": "http://purl.obolibrary.org/obo/mondo.owl",
"system": "https://monarchinitiative.org/",
},
"relation": "exactMatch",
},
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