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Version 0.5.0 - Parallel processing

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@DrYak DrYak released this 11 Oct 15:40

New features:

  • support processing multiple location in parallel (--n-cores)
  • support other input than tally of SVN mutation, e.g., use tables
    produced by COJAC.
  • option to specify a column to use as 'names' for the entries in tally table.
    By default, if 'pos' and 'base' exist a column 'mutations' will be created
    and used as name.
    Bootstraping needs such names for the entries.

Results altering change:

  • The random seed initialisation has changed since 0.4.x
    Results between this version v0.5.0 and v0.4.x aren't bit-perfect
    Seed is re-initialised per locataion so parallel and sequencial runs
    are identical.
    Each location gets a different seed.