fix to namespace

NAMESPACE

@@ -9,9 +9,9 @@ export(plot)
 export(show)
 export(summary)
 exportClasses(crop)
+exportClasses(endosim_col)
+exportClasses(endosim_mod)
 exportClasses(endosym)
-exportClasses(endosym_col)
-exportClasses(endosym_mod)
 exportClasses(initial)
 exportClasses(parasitoid)
 exportClasses(pest)

R/endosim_col.R

@@ -1,12 +1,12 @@
-#' An S4 class to store a collection of simulations with the Endosymbiont model
+#' An S4 class to store a collection of simulations with the endosymbiont model
 #' 
-#' @exportClass endosym_col
+#' @exportClass endosim_col
 #'
 #' @slot scenarios Dataframe defining which modules are active or deactivated in each simulated scenario
-#' @slot sims List of objects of class [endosym_mod-class], each corresponding to a row of \code{scenarios}
+#' @slot sims List of objects of class [endosim_mod-class], each corresponding to a row of \code{scenarios}
 
 
-methods::setClass("endosym_col",
+methods::setClass("endosim_col",
                   slots = c(scenarios = "data.frame",
                             sims = "list")
 )

R/endosim_mod.R

@@ -1,6 +1,6 @@
 #' An S4 class to store a simulation output
 #' 
-#' @exportClass endosym_mod
+#' @exportClass endosim_mod
 #'
 #' @slot pest name of the pest
 #' @slot crop name of the crop
@@ -18,7 +18,7 @@
 #' @slot para_df data.frame of parasitoid population through time
 #' @slot area area of crop (m2)
 
-methods::setClass("endosym_mod",
+methods::setClass("endosim_mod",
                   slots = c(pest = "character",
                             crop = "character",
                             endosymbiont = "character",

R/show-methods.R

@@ -7,7 +7,7 @@
 #' @docType methods
 #' @rdname show-methods
 
-setGeneric("show", function(x) standardGeneric("show"))
+setGeneric("show", function(object) standardGeneric("show"))
 
 #' @docType methods
 #' @aliases show,endosim_mod,ANY-method