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Release v2023.12.9
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cgohlke committed Dec 9, 2023
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:Author: `Christoph Gohlke <https://www.cgohlke.com>`_
:License: BSD 3-Clause
:Version: 2023.9.26
:Version: 2023.12.9
:DOI: `10.5281/zenodo.6795860 <https://doi.org/10.5281/zenodo.6795860>`_

Quickstart
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This revision was tested with the following requirements and dependencies
(other versions may work):

- `CPython <https://www.python.org>`_ 3.9.13, 3.10.11, 3.11.5, 3.12rc, 64-bit
- `NumPy <https://pypi.org/project/numpy/>`_ 1.25.2
- `Imagecodecs <https://pypi.org/project/imagecodecs/>`_ 2023.9.4
- `CPython <https://www.python.org>`_ 3.9.13, 3.10.11, 3.11.7, 3.12.1, 64-bit
- `NumPy <https://pypi.org/project/numpy/>`_ 1.26.2
- `Imagecodecs <https://pypi.org/project/imagecodecs/>`_ 2023.9.18
(required for encoding or decoding LZW, JPEG, etc. compressed segments)
- `Matplotlib <https://pypi.org/project/matplotlib/>`_ 3.7.3
- `Matplotlib <https://pypi.org/project/matplotlib/>`_ 3.8.2
(required for plotting)
- `Lxml <https://pypi.org/project/lxml/>`_ 4.9.3
(required only for validating and printing XML)
- `Zarr <https://pypi.org/project/zarr/>`_ 2.16.1
(required only for opening Zarr stores)
- `Fsspec <https://pypi.org/project/fsspec/>`_ 2023.9.2
- `Fsspec <https://pypi.org/project/fsspec/>`_ 2023.12.1
(required only for opening ReferenceFileSystem files)

Revisions
---------

2023.12.9

- Pass 5071 tests.
- Read 32-bit Indica Labs TIFF as float32.
- Fix UnboundLocalError reading big LSM files without time axis.
- Use os.sched_getaffinity, if available, to get the number of CPUs (#231).
- Limit the number of default worker threads to 32.

2023.9.26

- Pass 5069 tests.
- Lazily convert dask array to ndarray when writing.
- Allow to specify buffersize for reading and writing.
- Fix IndexError reading some corrupted files with ZarrTiffStore (#227).
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>>> with TiffWriter('temp.ome.tif', bigtiff=True) as tif:
... metadata={
... 'axes': 'TCYXS',
... 'SignificantBits': 10,
... 'SignificantBits': 8,
... 'TimeIncrement': 0.1,
... 'TimeIncrementUnit': 's',
... 'PhysicalSizeX': pixelsize,
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