chore: update dependencies and migrate to vitest

eslint.config.mjs

@@ -0,0 +1,16 @@
+import cheminfo from 'eslint-config-cheminfo';
+import globals from 'globals';
+
+export default [
+  ...cheminfo,
+  {
+    languageOptions: {
+      globals: {
+        ...globals.node,
+      },
+    },
+    rules: {
+      //      "camelcase": "off",
+    }
+  }
+]

package.json

@@ -17,8 +17,8 @@
     "prettier": "prettier --check src",
     "prettier-write": "prettier --write src",
     "test": "npm run test-coverage && npm run eslint && npm run prettier",
-    "test-coverage": "jest --coverage",
-    "test-only": "jest"
+    "test-coverage": "vitest run --coverage",
+    "test-only": "vitest"
   },
   "repository": {
     "type": "git",
@@ -35,20 +35,20 @@
     "testEnvironment": "node"
   },
   "devDependencies": {
-    "@babel/plugin-transform-modules-commonjs": "^7.24.1",
-    "@types/jest": "^29.5.12",
-    "@types/node": "^20.12.12",
+    "@babel/plugin-transform-modules-commonjs": "^7.24.8",
+    "@types/node": "^22.7.4",
+    "@vitest/coverage-v8": "^2.1.1",
     "cheminfo-build": "^1.2.0",
     "eslint": "^8.57.0",
-    "eslint-config-cheminfo": "^9.2.0",
-    "jest": "^29.7.0",
+    "eslint-config-cheminfo": "^11.1.2",
     "jest-matcher-deep-close-to": "^3.0.2",
-    "prettier": "^3.2.5",
-    "rollup": "^4.18.0"
+    "prettier": "^3.3.3",
+    "rollup": "^4.24.0"
   },
   "dependencies": {
     "common-spectrum": "2.8.0",
-    "ml-gsd": "^12.1.6"
+    "ml-gsd": "^12.1.8",
+    "vitest": "^2.1.1"
   },
   "info": {
     "logo": "https://raw.githubusercontent.com/cheminfo/font/main/src/uv/assignment.svg",

src/__tests__/index.test.js

@@ -1,5 +1,7 @@
-import { readFileSync } from 'fs';
-import { join } from 'path';
+import { readFileSync } from 'node:fs';
+import { join } from 'node:path';
+
+import { test, expect } from 'vitest'
 
 import { fromText } from '..';
 

src/from/fromJcamp.js

@@ -7,9 +7,9 @@ import { spectrumCallback } from './utils/spectrumCallback';
  * @param {ArrayBuffer|string} jcamp
  * @param {object} [options={}]
  * @param {string|number} [options.id=Math.random()]
- * @param {string} [options.label=options.id] human redeable label
- * @param {string} [options.spectrumCallback] a callback to apply on variables when creating spectrum. Default will add a and t
- * @return {Analysis} - New class element with the given data
+ * @param {string} [options.label=options.id] - human redeable label
+ * @param {string} [options.spectrumCallback] - a callback to apply on variables when creating spectrum. Default will add a and t
+ * @returns {Analysis} - New class element with the given data
  */
 export function fromJcamp(jcamp, options = {}) {
   return commonFromJcamp(jcamp, { ...options, spectrumCallback });

src/jsgraph/getAnnotations.js

@@ -1,5 +1,5 @@
 /**
- * @typedef {Object} Peak
+ * @typedef {object} Peak
  * @property {number} wavelength
  * @property {number} absorbance
  * @property {number} kind
@@ -8,13 +8,13 @@
 
 /**
  * Creates annotations for jsgraph that allows to display the result of peak picking
- * @param {array<Peak>} peaks
+ * @param {Array<Peak>} peaks
  * @param {object} [options={}]
  * @param {string} [options.fillColor='green']
  * @param {string} [options.strokeColor='red']
- * @param {string} [options.showKind=true] Display the kind, 'm', 'w', 'S'
- * @param {string} [options.showAssignment=true] Display the assignment
- * @param {function} [options.createFct] (annotation, peak) => {}: callback allowing to add properties
+ * @param {string} [options.showKind=true] - Display the kind, 'm', 'w', 'S'
+ * @param {string} [options.showAssignment=true] - Display the assignment
+ * @param {Function} [options.createFct] - (annotation, peak) => {}: callback allowing to add properties
  * @returns array
  */