Removed large files (#104)

* Added GrayscaleIssueManager

* DuplicatedIssueManager working

* Added NearDuplicatesManager

* Updated zscores to be vectorized

* Separated Light and Dark images

* Split summary and viz

* Print out the summary

* Changed the name of find_issues method

* Added new method for base class

* Fixed hot pixels detection

* Beautified print output

* Added incorrect zscore

* Fixed normalized score [0-1]

* Fixed scoring

* Added basic multithreading for image open

* Added clearer imagelab.visualize() outputs

* VERY JANKY: Images visualized in sorted order

* Resolved dark images questionable merge conflict

* entropy scaling changed

* Added threshold

Fixed duplicate and near duplicate

* Fixed all thresholds except hot pixels

* Added demo notebook on test dataset

* Added qualitative results for multiple datasets

* creating CI workflows & documentation about the repo (#30)



Co-authored-by: Jonas Mueller <[email protected]>

* Code refactoring according to Datalab structure (#31)

* Refactoring code according to  Datalab structure
* Formatted using black codestyle

* Update README.md to baseline for public package

* community pointers

* Update README.md with pr comment

Co-authored-by: Jonas Mueller <[email protected]>

* Update README.md with pr comment

Co-authored-by: Jonas Mueller <[email protected]>

* Update README.md with pr comment

Co-authored-by: Jonas Mueller <[email protected]>

* Update README.md with pr comment

Co-authored-by: Jonas Mueller <[email protected]>

* Added s3 download link

* add clean-vision logo (#49)

* wording

* Added check for white images (#34)

* Changes
- Added visualization manager for different kinds of visualization
- Added check for light images that reuses compute
- Updated demo notebook

* Added different examples in run.py on how to use imagelab'

* Modified code to run imagelab.find_issues() incrementally

* Resolved PR comment

* Changed image_path column to an index for issues dataframe

* Changed ImageProperty to be a constant string

* Updated comment

* change skip_set to defer_set

* Small refactoring

* Changed hyperparameter to dictionary

* Bug fixes

* Added _set_default_config method

* Moved non user facing files to utils

* Added issue_name variable to issue_manager

* Changed verbosity to an int argument which sets the default args for report

* Changed issue manager to a python property

* fix: 🩹 remove classmethod from issue_name property

Chaining @classmethod and @Property results is deprecated (removed in python 3.11).
Setting a class variable for concrete classes should work just fine.

* style: 🎨 invert threshold condition

The main logic of the `set_hyperparameters` method is no longer nested.

* style: 🎨 rename parrameter in `update_summary`

The `summary` attribute is a dataframe, while the parameter (with the same name) is a dictionary. Renaming the parameter should avoid any confusion.

* refactor: 🔥 remove unnessary dataframe initialization

the `issues` dataframe is already created when instantiating the issue manager.

* style: ⚰️ remove commented line in __init__

* refactor: ♻️ remove unused variables/parameters

* refactor: ♻️ iterrows -> itertuples

This allows us to remove the unused index in the iterator.

* style: 🎨 apply black formatter

* style: 🚨 drop f-string formatting for string without a placeholder

* Added back dataframe initialization

Co-authored-by: Elías Snorrason <[email protected]>

* Test image property helpers and split functions. (#35)

* refactor: ♻️ extract brightness calculation to a separate function

Use more descriptive variable names for unpacked RGB-values.

* refactor: ⚰️ remove unused __init__ method in ABC

* fix: 🩹 fix import of IssueType

* test: ✅ add full test coverage for image property helpers

Hacky way to mock the ImageStat.Stat class for grayscale & RGB images.

* style: 🎨 update formatting

* fix: 🥅 catch ValueError instead of IndexError for unpacking

Co-authored-by: Sanjana Garg <[email protected]>
Co-authored-by: Sanjana Garg <[email protected]>

* Name change (#53)

* Renamed library to cleanvision

* update readme to reflect package name change

assumes github project will also be renamed cleanvision as well

* Fix name convention in ci job title

* Update to CleanVision in DEVELOPMENT.md

* Updated CONTRIBUTING and issue templates

* Fixed bug report name-change

* Updated tests

Co-authored-by: Jonas Mueller <[email protected]>
Co-authored-by: Ulyana <[email protected]>
Co-authored-by: Ulyana <[email protected]>

* add copyright statement

* CI workflow update (#56)

* Update CI workflow

* Moved setup python environment code to script

* Update run script command

* Made bash script executable

* Updated shell to bash

* changed script run command in typecheck job'

* Custom issue (#55)

* Changes
- Added visualization manager for different kinds of visualization
- Added check for light images that reuses compute
- Updated demo notebook

* Added different examples in run.py on how to use imagelab'

* Modified code to run imagelab.find_issues() incrementally

* Resolved PR comment

* Changed image_path column to an index for issues dataframe

* Changed ImageProperty to be a constant string

* Updated comment

* change skip_set to defer_set

* Small refactoring

* Changed hyperparameter to dictionary

* Bug fixes

* Added _set_default_config method

* Moved non user facing files to utils

* Added issue_name variable to issue_manager

* Changed verbosity to an int argument which sets the default args for report

* Changed issue manager to a python property

* Added custom_issue_manager

* Added list_issues methods

* Added register decorator for issue_managers

* Added todos of making changes for setting parameters

* Create new issue managers everytime an issue is checked

* Added parameter processing in issue_manager

* Fixed bugs

* Added visualization for custom issue

* Updated package dependency

* Formatted setup.py

* Added example of list_default_issue_types and list_possible_issue_types

* Moved viz method out of if else:

* Renamed initialize_params to set_params

* Fixed bug in imagelab._update_issues

* Added get_stats method

* Removed unnecessary variable

* Forward slash not supported by python3.7

* removed unused import

* Deleted empty file for IssueManagerFactory and removed unused imports

* Removed blank line

* Updated dependencies and their versions compatible

* added suggested comment

* Updated imagelab examples

* comment suggestion

Co-authored-by: Elías Snorrason <[email protected]>

* commit suggestion

Co-authored-by: Elías Snorrason <[email protected]>

* Update cleanvision/imagelab.py

Co-authored-by: Elías Snorrason <[email protected]>

* Remove unnecessary else

* black formatting

* Update cleanvision/issue_managers/__init__.py

Co-authored-by: Elías Snorrason <[email protected]>

* Update cleanvision/issue_managers/image_property_issue_manager.py

Co-authored-by: Elías Snorrason <[email protected]>

* Update cleanvision/issue_managers/__init__.py

Co-authored-by: Elías Snorrason <[email protected]>

* Removed imagelab_info param keep example simple

* Revert "Removed imagelab_info param keep example simple"

This reverts commit 3b783bded82bd44070c87d0ac1543b2b24a282f4.

* Added aspect ratio issue check (#57)

* Added aspect ratio issue check

* refactoring: renamed **helper to **property

* Entropy check (#58)

* Added LowComplexity check, converted params into dict for image_property_issue_manager

* Remove unused lines

* Update cleanvision/imagelab.py

Co-authored-by: Jonas Mueller <[email protected]>

* Update cleanvision/imagelab.py

Co-authored-by: Jonas Mueller <[email protected]>

* Renamed LowComplexity to LowInformation

* Changed enum name

* Fixed tests

Co-authored-by: Jonas Mueller <[email protected]>

* Renamed ExtremeAspectRatio to OddAspectRatio

* bug fix: deep update info dict in imagelab

* Added abstractmethod get_default_params

* Changed issue_type strings to snake_case

Co-authored-by: Jonas Mueller <[email protected]>

* Duplicates check (#61)

* Added aspect ratio issue check

* refactoring: renamed **helper to **property

* Entropy check (#58)

* Added LowComplexity check, converted params into dict for image_property_issue_manager

* Remove unused lines

* Update cleanvision/imagelab.py

Co-authored-by: Jonas Mueller <[email protected]>

* Update cleanvision/imagelab.py

Co-authored-by: Jonas Mueller <[email protected]>

* Renamed LowComplexity to LowInformation

* Changed enum name

* Fixed tests

Co-authored-by: Jonas Mueller <[email protected]>

* Renamed ExtremeAspectRatio to OddAspectRatio

* bug fix: deep update info dict in imagelab

* Added abstractmethod get_default_params

* Changed issue_type strings to snake_case

* Added duplicate images checks: exact duplicates and near duplicates

* Fixed all bugs in duplicate issue manager

* removed unnecessary code

* Substituted _LITERAL with type annotations

Co-authored-by: Jonas Mueller <[email protected]>

* Moved custom_issue_manager.py to examples/

Co-authored-by: Elías Snorrason <[email protected]>
Co-authored-by: Jonas Mueller <[email protected]>

* Added ignore to libraries missing official mypy stubs

* backwards pandas compatibility

* Fixed typing in base_issue_manager.py

* Fixed typing in constants.py

* Fix typing for viz_manager.py

* black format + remove unused functions

* Fixed typing in issue_managers/__init__.py

* Added blurriness check (#65)

* Changes
- Added visualization manager for different kinds of visualization
- Added check for light images that reuses compute
- Updated demo notebook

* Added different examples in run.py on how to use imagelab'

* Modified code to run imagelab.find_issues() incrementally

* Resolved PR comment

* Changed image_path column to an index for issues dataframe

* Changed ImageProperty to be a constant string

* Updated comment

* change skip_set to defer_set

* Small refactoring

* Changed hyperparameter to dictionary

* Bug fixes

* Added _set_default_config method

* Moved non user facing files to utils

* Added issue_name variable to issue_manager

* Changed verbosity to an int argument which sets the default args for report

* Changed issue manager to a python property

* Added custom_issue_manager

* Added list_issues methods

* Added register decorator for issue_managers

* Added todos of making changes for setting parameters

* Create new issue managers everytime an issue is checked

* Added parameter processing in issue_manager

* Fixed bugs

* Added visualization for custom issue

* Updated package dependency

* Formatted setup.py

* Added example of list_default_issue_types and list_possible_issue_types

* Moved viz method out of if else:

* Renamed initialize_params to set_params

* Fixed bug in imagelab._update_issues

* Added get_stats method

* Removed unnecessary variable

* Forward slash not supported by python3.7

* removed unused import

* Deleted empty file for IssueManagerFactory and removed unused imports

* Removed blank line

* Updated dependencies and their versions compatible

* added suggested comment

* Updated imagelab examples

* comment suggestion

Co-authored-by: Elías Snorrason <[email protected]>

* commit suggestion

Co-authored-by: Elías Snorrason <[email protected]>

* Update cleanvision/imagelab.py

Co-authored-by: Elías Snorrason <[email protected]>

* Remove unnecessary else

* black formatting

* Update cleanvision/issue_managers/__init__.py

Co-authored-by: Elías Snorrason <[email protected]>

* Update cleanvision/issue_managers/image_property_issue_manager.py

Co-authored-by: Elías Snorrason <[email protected]>

* Update cleanvision/issue_managers/__init__.py

Co-authored-by: Elías Snorrason <[email protected]>

* Removed imagelab_info param keep example simple

* Revert "Removed imagelab_info param keep example simple"

This reverts commit 3b783bded82bd44070c87d0ac1543b2b24a282f4.

* Added aspect ratio issue check (#57)

* Added aspect ratio issue check

* refactoring: renamed **helper to **property

* Entropy check (#58)

* Added LowComplexity check, converted params into dict for image_property_issue_manager

* Remove unused lines

* Update cleanvision/imagelab.py

Co-authored-by: Jonas Mueller <[email protected]>

* Update cleanvision/imagelab.py

Co-authored-by: Jonas Mueller <[email protected]>

* Renamed LowComplexity to LowInformation

* Changed enum name

* Fixed tests

Co-authored-by: Jonas Mueller <[email protected]>

* Renamed ExtremeAspectRatio to OddAspectRatio

* bug fix: deep update info dict in imagelab

* Added abstractmethod get_default_params

* Changed issue_type strings to snake_case

Co-authored-by: Jonas Mueller <[email protected]>

* Duplicates check (#61)

* Added aspect ratio issue check

* refactoring: renamed **helper to **property

* Entropy check (#58)

* Added LowComplexity check, converted params into dict for image_property_issue_manager

* Remove unused lines

* Update cleanvision/imagelab.py

Co-authored-by: Jonas Mueller <[email protected]>

* Update cleanvision/imagelab.py

Co-authored-by: Jonas Mueller <[email protected]>

* Renamed LowComplexity to LowInformation

* Changed enum name

* Fixed tests

Co-authored-by: Jonas Mueller <[email protected]>

* Renamed ExtremeAspectRatio to OddAspectRatio

* bug fix: deep update info dict in imagelab

* Added abstractmethod get_default_params

* Changed issue_type strings to snake_case

* Added duplicate images checks: exact duplicates and near duplicates

* Fixed all bugs in duplicate issue manager

* removed unnecessary code

* Substituted _LITERAL with type annotations

Co-authored-by: Jonas Mueller <[email protected]>

* Moved custom_issue_manager.py to examples/

* Added issue_type Blurred

* Added blurred image property

* Removed dependency on IssueType enum key to reduce steps for adding custom issue manager

* Added issue_types argument in imagelab.report()

* Changed image_property names to snake_case

* Updated example script and notebook

* Added check for grayscale images (#66)

* Renamed Blurred to Blurry

Co-authored-by: Elías Snorrason <[email protected]>
Co-authored-by: Jonas Mueller <[email protected]>

* Removed redundant code (#71)

* fixed issue manager to pass mypy

* Added ignore type into .mypy.init

* Addressed comments with base issue manager

* Address pandas <1.5.0 compatibility  (#70)

* changed reset_index() function to pandas<1.5.0 version

* black compatibility

* Fixed merge issue (removed two issue_mannagers

* Fixed black formatting

* Added table of issues to Readme (#75)

* Added table of issues to Readme

* Update README.md

Co-authored-by: Jonas Mueller <[email protected]>

* Update README.md

Co-authored-by: Jonas Mueller <[email protected]>

* Update README.md

Co-authored-by: Jonas Mueller <[email protected]>

* Update README.md

Co-authored-by: Jonas Mueller <[email protected]>

* Update README.md

Co-authored-by: Jonas Mueller <[email protected]>

Co-authored-by: Jonas Mueller <[email protected]>

* Fix basic typing in image_property.py

* Improved function signatures image_property.py

* Removed deprecated image_dataset.py

* Corrected expected PIL type to Image.Image

* Fixed image_property_issue_manager.py typing

* Fixed typing duplicate_issue_manager.py

* Figure out Liskzov principal violation

* Addressed small typing utils/viz

* Fixed typing in imagelab.py

 * Added required params to IssueManager

* Added ignore type for np.diff

* Removed unused imports

* Fix typecheck

* Unit tests for methods of ImagePropertyIssueManager and DupicateIssueManager (#74)

* Adding tests for image property issue manager

* Added test for image_property_issue_manager.set_params()

* Added test for image_property_issue_manager._get_defer_set()

* Changed structure of init method to be more consistent

* Fixed tests

* Added tests for methods in DuplicateIssueManager

* Added test for DuplicateIssueManager._get_issue_types_to_compute

* Added unit tests for duplicate issue manager

* Fixed bugs after tests

* Updated comments

* black formatting

* Updated documentation for test_update_info in test_duplicate_issue_manager.py

* Improved ids

* Updated test_remove_exact_duplicates_from_near

* Removed redundant test cases

* Changed constants to all caps

* Added a before check for set_params test

* Added ids for tests in TestImagePropertyIssueManager

* added before check for set_params() test

* refactor: 🏷️ remove self: TypeVar(...) type-hints

None of the type parameters occur more than once in a signature.

Also removed unused VizManager initializer.

* refactor: 🚨 remove unused "type: ignore" comment

* refactor: 🏷️ wrap type of cmap in Optional

cmap has a default value of None

* refactor: ♻️ declare `visualization` and `issue_name` as class variables

* fix: 🐛 fix pd.Series type which is not subscriptable

* fix: ✅ pass raw_scores as keyword arguments

ImageProperty.get_scores only accepts keyword arguments.
Test error was: "TypeError: BrightnessProperty.get_scores() takes 1 positional argument but 2 were given"

* Address pr comments

* Black formatting

* Fix merge issue

* Fixed black, lint

* Fixed mypy broken by merge

* Added save and load functionality (#77)

* Adding tests for image property issue manager

* Added test for image_property_issue_manager.set_params()

* Added test for image_property_issue_manager._get_defer_set()

* Changed structure of init method to be more consistent

* Fixed tests

* Added tests for methods in DuplicateIssueManager

* Added test for DuplicateIssueManager._get_issue_types_to_compute

* Added unit tests for duplicate issue manager

* Fixed bugs after tests

* Updated comments

* black formatting

* Updated documentation for test_update_info in test_duplicate_issue_manager.py

* Improved ids

* Updated test_remove_exact_duplicates_from_near

* Removed redundant test cases

* Changed constants to all caps

* Added a before check for set_params test

* Added ids for tests in TestImagePropertyIssueManager

* added before check for set_params() test

* Added save and load functionality

* Adding documentation on how to use cleanvision

* Added detailed instructions on how to use Imagelab

* Removed unnecessary file committed

* Apply suggestions from code review

Co-authored-by: Jonas Mueller <[email protected]>

* Update cleanvision/imagelab.py

Co-authored-by: Elías Snorrason <[email protected]>

* Update cleanvision/imagelab.py

Co-authored-by: Elías Snorrason <[email protected]>

* Update cleanvision/imagelab.py

Co-authored-by: Elías Snorrason <[email protected]>

* Added check for invalid path and empty directory

* Removed duplicate line

* Updated demo notebook with Ulyana's comments

* Merge conflict remnants

* black formatting

---------

Co-authored-by: Jonas Mueller <[email protected]>
Co-authored-by: Elías Snorrason <[email protected]>

* Reorganize the readme (#81)

* test commit

* reorganize the readme

* Packaging (#83)

* Adding tests for image property issue manager

* Added test for image_property_issue_manager.set_params()

* Added test for image_property_issue_manager._get_defer_set()

* Changed structure of init method to be more consistent

* Fixed tests

* Added tests for methods in DuplicateIssueManager

* Added test for DuplicateIssueManager._get_issue_types_to_compute

* Added unit tests for duplicate issue manager

* Fixed bugs after tests

* Updated comments

* black formatting

* Updated documentation for test_update_info in test_duplicate_issue_manager.py

* Improved ids

* Updated test_remove_exact_duplicates_from_near

* Removed redundant test cases

* Changed constants to all caps

* Added a before check for set_params test

* Added ids for tests in TestImagePropertyIssueManager

* added before check for set_params() test

* Added save and load functionality

* Adding documentation on how to use cleanvision

* Added detailed instructions on how to use Imagelab

* Removed unnecessary file committed

* Apply suggestions from code review

Co-authored-by: Jonas Mueller <[email protected]>

* Update cleanvision/imagelab.py

Co-authored-by: Elías Snorrason <[email protected]>

* Update cleanvision/imagelab.py

Co-authored-by: Elías Snorrason <[email protected]>

* Update cleanvision/imagelab.py

Co-authored-by: Elías Snorrason <[email protected]>

* Added check for invalid path and empty directory

* Removed duplicate line

* Updated demo notebook with Ulyana's comments

* Added pyproject.toml config for build

* Fixed missing dependency

* Specified filepath as a command line argument for example script

* Updated path in jupyter notebook

* Fixed CI pipeline

---------

Co-authored-by: Jonas Mueller <[email protected]>
Co-authored-by: Elías Snorrason <[email protected]>

* Add basic docs build

* Add readthedocs to CI

* Added url slug to docs preview

* test

* test 2

* Add correct project slug

* Add readthedocs conf to root

* multiprocessing

* fix bugs

* typing and black

* psutil handling, plus some typing errs

* add back calculate brightness

* Save

* Added basic documentation (no formating)

* Add requirements.txt for docs build

* Mypy annotations (#85)

* fixed mypy errors

* Updated compute summary of duplicate issue manager

* Fixed mypy error

* Moved params from init to find_issues

* Black formatting

* Updated custom example

* Moved demo notebook to examples/

* Black formatting

* minor fixes

* fix black

* failed attempt at fixing mypy issue

* minor fixes

* Added visualize by filepaths functionality in imagelab.visualize() (#88)

* Added visualize by filepaths functionality in imagelab.visualize()

* black formatting

* Update examples/run.py

Co-authored-by: Jonas Mueller <[email protected]>

* Update examples/run.py

Co-authored-by: Jonas Mueller <[email protected]>

* Update examples/run.py

Co-authored-by: Jonas Mueller <[email protected]>

* Update examples/run.py

Co-authored-by: Jonas Mueller <[email protected]>

* Update examples/run.py

Co-authored-by: Jonas Mueller <[email protected]>

* Update examples/run.py

Co-authored-by: Jonas Mueller <[email protected]>

* Update examples/run.py

Co-authored-by: Jonas Mueller <[email protected]>

* Update examples/run.py

Co-authored-by: Jonas Mueller <[email protected]>

* Update examples/run.py

Co-authored-by: Jonas Mueller <[email protected]>

* Comment updates

* Comment updates

* Fixed formatting and mypy errors

* Change python environment of mypy check to reflect lowest version

* Removed pandas-stubs from dev requirements for these reasons
- compatible only with pytho3.8+
- Was giving wrong error for pd.Dataframe.from_dict() usage, the documentation also says it is narrower than what pandas allows

---------

Co-authored-by: Jonas Mueller <[email protected]>

* Add codecov for testing (#87)

* Update codecov to v3

* Fix correct directory point

* Point to correct test dir

* Install cleanvision correctly

* Change setup.py to always load package in editable mode

* Update .github/scripts/setup_python_env.sh

Co-authored-by: Sanjana <[email protected]>

* Update .github/workflows/ci.yml

Co-authored-by: Sanjana <[email protected]>

---------

Co-authored-by: Sanjana <[email protected]>

* Added sidebar + improve theme

* Updated dev guide (#93)

* Switch to furo

* Black formatting

* Add furo into requirements

* Fix embarassingly wrong spelling of instalation

* Add options for copybutton docs/source/conf.py

Co-authored-by: Elías Snorrason <[email protected]>

* Remove venv from quickstart install

Co-authored-by: Elías Snorrason <[email protected]>

* Update docs/source/cleanvision/imagelab.rst

Co-authored-by: Elías Snorrason <[email protected]>

* Update docs/source/index.rst

Co-authored-by: Elías Snorrason <[email protected]>

* Addressed comments

* remove benchmarking notebook, which will be in sandbox

* find_issues multiprocessing (#86)

* multiprocessing

* fix bugs

* typing and black

* psutil handling, plus some typing errs

* add back calculate brightness

* minor fixes

* fix black

* failed attempt at fixing mypy issue

* minor fixes

* remove benchmarking notebook, which will be in sandbox

* fix link to examples notebook

* Fix examples notebook link

* undoced memebers will autodoc

* Change source folder of package

* Update requirements.txt

* Add tqdm into requirements.txt

* Added next import

* Fixing autodoc "Any" class

* Give more max depth

* Update docs/source/conf.py

Co-authored-by: Sanjana <[email protected]>

* Added documentation link in readme (#96)



Co-authored-by: Jonas Mueller <[email protected]>

* Updated python version for mypy to 3.11 (#95)

* Bug fixes (#99)

* Fixed bug in gettin filepaths for nested dataset directories

* Fixed error in get_max_n_jobs

* Replaced ImageGrid with subplots as ImageGrid was cropping images weirdly, which skipped the main object in the image sometimes

* Fixed bug in kwargs type check for issue_manager.find_issues()

* Removed unused parameter cmap and handled showing a grid of just 1 image

* Removed unused import

* Added docstrings for Imagelab module, class, public methods and attributes (#91)

* Added docstrings for Imagelab() and get_filepaths()

* Added docstring for Imagelab._set_default_config()

* Added docstring for imagelab.visualize()

* Added docstrings in Imagelab.find_issues()

* Added spacing in visualize documentation

* Added docstrings for Imagelab.list_possible_issue_types()

* Added examples in Imagelab.visualize()

* Added docstrings for Imagelab.report()

* Added docstrings for Imagelab.load()

* Added docstrings for Imagelab class

* Added docstrings for imagelab.py module

* Fixed codeblock formatting

* Added docstring to Imagelab.save()

* Update src/cleanvision/utils/utils.py

Co-authored-by: Elías Snorrason <[email protected]>

* Update src/cleanvision/imagelab.py

Co-authored-by: Elías Snorrason <[email protected]>

* Update src/cleanvision/imagelab.py

Co-authored-by: Jonas Mueller <[email protected]>

* Update src/cleanvision/imagelab.py

Co-authored-by: Jonas Mueller <[email protected]>

* Update src/cleanvision/imagelab.py

Co-authored-by: Jonas Mueller <[email protected]>

* Update src/cleanvision/imagelab.py

Co-authored-by: Jonas Mueller <[email protected]>

* Update src/cleanvision/imagelab.py

Co-authored-by: Jonas Mueller <[email protected]>

* Update src/cleanvision/imagelab.py

Co-authored-by: Jonas Mueller <[email protected]>

* Update src/cleanvision/imagelab.py

Co-authored-by: Jonas Mueller <[email protected]>

* Update src/cleanvision/imagelab.py

Co-authored-by: Jonas Mueller <[email protected]>

* Update src/cleanvision/imagelab.py

Co-authored-by: Jonas Mueller <[email protected]>

* Update src/cleanvision/imagelab.py

Co-authored-by: Jonas Mueller <[email protected]>

* Update src/cleanvision/imagelab.py

Co-authored-by: Jonas Mueller <[email protected]>

* Update src/cleanvision/imagelab.py

Co-authored-by: Jonas Mueller <[email protected]>

* Update src/cleanvision/imagelab.py

Co-authored-by: Jonas Mueller <[email protected]>

* Update src/cleanvision/imagelab.py

Co-authored-by: Jonas Mueller <[email protected]>

* Added newline after code-block for proper formatting in sphinx documentation

* Improved docstrings

* Update src/cleanvision/imagelab.py

Co-authored-by: Jonas Mueller <[email protected]>

* Update src/cleanvision/imagelab.py

Co-authored-by: Jonas Mueller <[email protected]>

* Update src/cleanvision/imagelab.py

Co-authored-by: Jonas Mueller <[email protected]>

* Update src/cleanvision/imagelab.py

Co-authored-by: Jonas Mueller <[email protected]>

* Update src/cleanvision/imagelab.py

Co-authored-by: Jonas Mueller <[email protected]>

* Update src/cleanvision/imagelab.py

Co-authored-by: Jonas Mueller <[email protected]>

* Update src/cleanvision/imagelab.py

Co-authored-by: Jonas Mueller <[email protected]>

* Update src/cleanvision/imagelab.py

Co-authored-by: Jonas Mueller <[email protected]>

* Changed style of param type

* Added cross references

* Docstring formatting improvements

* Update src/cleanvision/imagelab.py

Co-authored-by: Jonas Mueller <[email protected]>

* Removed examlpes_per_issue argument from visualize

* Removed docstring for examples_per_issue

* Added argument filepaths to Imagelab()

* Renamed {issue_type}_bool column to is_{issue_type}_issue

* Fixed mypy annotations

* Added an argument to avoid overwriting files by default

* Removed multiple import lines from same package

* Removed an extra line

* Update src/cleanvision/imagelab.py

Co-authored-by: Jonas Mueller <[email protected]>

* Resolved comment

* Resolved comment

* Specify only one of data_path or filepaths, in all other cases throw ValueError

* Added documentation for n_jobs

* Improved docs formatting

* Improved docs formatting

* Fixed get_max_n_jobs

* Update src/cleanvision/imagelab.py

Co-authored-by: Jonas Mueller <[email protected]>

* Fixed flake8 error

* Fixed mypy error

* Update src/cleanvision/imagelab.py

Co-authored-by: Jonas Mueller <[email protected]>

* Renamed allow_overwrite to force

* Updated imagelab.report()
- Removed num_top_issues argument as it is unnecessary and can be controlled by verbosity
- Changed max_prevalence to filter out issues in both cases where no issue_types are specified and also where issue_types are specified

* Filter issues first and then limit by number of issues to report

* Added print statement to indicate more issues were found

---------

Co-authored-by: Elías Snorrason <[email protected]>
Co-authored-by: Jonas Mueller <[email protected]>

* limit maximum number of procs in multiprocessing

* black style

* move max_procs def to utils/constants

---------

Co-authored-by: Ulyana <[email protected]>
Co-authored-by: krmayankb <[email protected]>
Co-authored-by: Jonas Mueller <[email protected]>
Co-authored-by: Chris Mauck <[email protected]>
Co-authored-by: Elías Snorrason <[email protected]>
Co-authored-by: Ulyana <[email protected]>
Co-authored-by: clu0 <[email protected]>
Co-authored-by: clu0 <[email protected]>