Summaries of journal articles and various tools discussed in csabaiBio meetings
| short title | references | presenter | slides | date |
|---|---|---|---|---|
| CoVFIT (viral fitness with PLM) | https://doi.org/10.1101/2024.03.15.584819 | Orsi | 2024/04/09 | |
| Furin cleavage site in SARS-CoV-2 | - | Anna | 2024/04/09 | |
| Foundation models in biology | - | Csaba | 2024/03/12 | |
| EVEscape (SARS-CoV-2) | https://doi.org/10.1038/s41586-023-06617-0 | Orsi | 2023/11/28 | |
| CoVEO with chatGPT | - | Krisztián | 2023/11/28 | |
| Bloom: SARS-CoV-2 mutational fitness | https://doi.org/10.1101/2023.01.30.526314 | Orsi | 2023/11/14 | |
| Viruses in bats | https://doi.org/10.1016/j.isci.2022.104782 | Krisztián | 2023/11/14 | |
| AlphaMissense | https://doi.org/10.1126/science.adg7492 | Orsi | 2023/10/17 | |
| Predicting mutation spread in SARS-CoV-2 | https://doi.org/10.1126/scitranslmed.abk3445 | Orsi | 2022/02/08 | |
| Late relapse of breast cancer | https://doi.org/10.1038/s41586-019-1007-8 | Orsi | 2020/09/25 | |
| Loss of germinal centers in COVID-19 | https://doi.org/10.1016/j.cell.2020.08.025 | Krisztián | 2020/09/07 |