Move citation.cff validation to pre-commit check (#165)

* move citation.cff validation to pre-commit check

* remove cffconvert from dev deps

* update docs

* update lockfile

* update lockfile with new changes

.github/workflows/test.yml

@@ -33,7 +33,5 @@ jobs:
         run: poetry install --no-interaction --no-ansi
       - name: Run sphinx-docs build test
         run: poetry run sphinx-build docs/source doctest -W
-      - name: Run citation file test
-        run: poetry run cffconvert --validate
       - name: Run pytest
         run: poetry run pytest

.pre-commit-config.yaml

@@ -62,6 +62,10 @@ repos:
     rev: v1.8.0
     hooks:
       - id: mypy
+  - repo: https://github.com/citation-file-format/cffconvert
+    rev: 5295f87c0e261da61a7b919fc754e3a77edd98a7
+    hooks:
+      - id: validate-cff
   - repo: https://github.com/PyCQA/pylint
     rev: v3.0.3
     hooks:

docs/source/contributing.md

@@ -137,7 +137,6 @@ Automated testing is performed using [GitHub Actions](https://docs.github.com/en
    Example test command: `% poetry run pytest`
 1. [sphinx-build](https://www.sphinx-doc.org/en/master/man/sphinx-build.html) provides documentation website build checks via [`-W`](https://www.sphinx-doc.org/en/master/man/sphinx-build.html#cmdoption-sphinx-build-W) (which turns warnings into errors).
    Example command: `% poetry run sphinx-build docs/source docs/build -W`
-1. [cffconvert](https://github.com/citation-file-format/cffconvert) provides [CITATION.cff file](https://citation-file-format.github.io/) formatting checks. Example command: `% poetry run cffconvert --validate`
 1. [pre-commit](https://pre-commit.com/) provides various checks which are treated as failures in automated testing.
    Example command `% pre-commit run -all-files`
 

pyproject.toml

@@ -36,7 +36,6 @@ Sphinx = "^6.0.0"
 myst-parser = "^2.0.0"
 sphinxcontrib-mermaid = "^0.9.0"
 moto = {extras = ["s3", "server"], version = "^4.0.0"}
-cffconvert = "^2.0.0"
 cytominer-database = "^0.3.4"
 pycytominer = "^1.1.0"
 dunamai = "^1.19.0"