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Kristina Hanspers edited this page Jul 31, 2018 · 1 revision

Cytoscape Automation Wiki

This wiki contains supporting documentation for Cytoscape Automation scripters and developers.

Frequently Asked Questions about Cytoscape Automation -- a good place to start

Step-wise installation instructions leading to RCy3 vignettes.

How to easily experiment with Cytoscape Automation

Script Writers

An index of links to useful Workflows in scripting languages such as R and Python

A collection of sample scripts that use Cytoscape Automation

App Developers

How to add Automation to an App you already maintain

How to build CI Responses for your Automation Functions.

How to access an app's automation features from clients, web browsers, and the Swagger UI

How to write integration tests in a scripting language to test your App

A collection of sample Apps that implement Cytoscape Automation

Best Practices

Web developers

How to add Automation to web page