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# Change log | ||
All notable changes to this project will be documented in this file. | ||
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## [0.2.0] | ||
### Added | ||
- FRiP can now be calculated based on reference peaks | ||
- Pipeline now reports Picard estimated library size statistic | ||
- Added option for pyadapt trimming | ||
- Added example project using 'gold standard' data | ||
- Added new resource package grades | ||
- Added preliminary 'exact cuts' scripts, but they are not yet used | ||
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### Changed | ||
- Improved README | ||
- Changed filename of the TSS file | ||
- Reorganized structure of alignment code | ||
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## [0.1.0] | ||
### Added | ||
- First release of ATAC-seq pypiper pipeline |