v0.11.3

[0.11.3] -- 2024-06-05

Changed

• Pin Pipestat (pipestat==0.6.0), Looper (looper==1.6.0), and Pypiper (piper==0.14.0) versions to ensure compatibility

v0.11.2

[0.11.2] -- 2024-01-22

Fixed

• fix fastqc path Issue #268

v0.11.1

[0.11.1] -- 2024-01-17

Fixed

• changed PEPATACr.R to use lapply instead of sapply when converting yaml to data.table object

v0.11.0

[0.11.0] -- 2023-12-22

Fixed

• adjusted requirements and docs for Looper 1.6.0, Pipestat v0.6.0, and Pypiper 0.14.0

Changed

• pipeline uses MACS3 instead of MACS2
• output schema is now a pipestat compatible JSON Schema
• collator now outputs with record_identifier name summary

v0.10.5

• update looper requirements to v1.4.2

v0.10.4

• adjusted requirements for Looper (1.4.1 and above) and Eido (0.2.0 and above)

v0.10.3

See CHANGELOG.md for release notes.

v0.10.2

See CHANGELOG.md for release notes.

v0.10.1

See CHANGELOG.md for release notes.

v0.10.0

See CHANGELOG.md for release notes.