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spheroid-analysis

Pixel level

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  • gif_plotting.ipynb
    • Creates gifs with distributions
  • noise_analysis.ipynb
    • tests different percentages of inner and outer in how they affect the noise
  • intrinsic_extrinsic.ipynb
    • Intrinsic and extrinsic noise analysis

Cell level

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  • cell_level_analysis.ipynb
    • Looks at noise in cell level using cell segmentation algorithm

Experimental

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  • concentration_diam.ipynb
    • Looks at the relationship between cell suspension concentration and diameter to control size of spheroids

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