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Updated organization of repository and edited entity resolver.
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data/entity_resolver_output/er-out-epidemic-tuples-2018-11-01.csv
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,146 @@ | ||
| index,report_id,epidemic_date,flu_pathogen,location,country,host | ||
| 11,2013_07_18_1,2013-07-18,H5N1 subtype,Karnataka (admin level 1),India,Aves | ||
| 14,2013_07_05_4,2013-07-05,H7N9 subtype,Sechelt Indian Government District (admin level 2); Sunshine Coast Regional District (admin level 1),Canada,Homo sapiens | ||
| 23,2017_02_07_11,2017-02-07,H5N8 subtype,Struga Municipality (admin level 1),Macedonia,Galliformes; Aves | ||
| 24,2015_06_19_3,2015-06-19,H5N1 subtype,Amol County (admin level 2); Mazandaran Province (admin level 1),Iran,Aves; Galliformes | ||
| 34,2016_10_03_1,2016-10-03,H5N5 subtype,Magellan and the Chilean Antarctic Region (admin level 1),Chile,Metazoa; Aves | ||
| 38,2007_08_06_3,2007-07-24,H5N1 subtype,Yangon Region (admin level 1),Myanmar,Galliformes; Gallus gallus | ||
| 41,2012_06_28_2,2012-06-13,H7N3 subtype,Jalisco (admin level 1),Mexico,Gallus gallus; Aves; Galliformes; Homo sapiens | ||
| 55,2008_03_27_5,2008-03-27,H5N1 subtype,Luang Namtha Province (admin level 1),Laos,Gallus gallus; Aves; Anas | ||
| 56,2009_11_20_1,2009-11-05,H5N3 subtype,Prague (admin level 1),Czech Republic,Aves | ||
| 90,2016_09_09_4,2016-09-09,H5N8 subtype,"Ojeong-dong (baranggay sa Habagatang Korea, Gyeonggi-do) (admin level 2); Bucheon (admin level 1)",South Korea,Gallus gallus; Anas | ||
| 104,2008_08_01_5,2008-08-01,H5N1 subtype,Thailand (country),Thailand,Homo sapiens | ||
| 111,2007_12_18_5,2007-12-10,H5N1 subtype,Poland (country),Poland,Galliformes; Aves | ||
| 126,2016_01_22_4,2016-01-22,H5N1 subtype,Nigeria (country),Nigeria,Aves | ||
| 142,2008_11_14_4,2008-11-08,H5N1 subtype,Egypt (country),Egypt,Homo sapiens | ||
| 146,2012_09_20_1,2012-09-11,H5N1 subtype,People's Republic of China (country),People's Republic of China,Galliformes; Anas | ||
| 201,2017_03_22_4,2017-03-22,H5N1 subtype,Malaysia (country),Malaysia,Gallus gallus; Galliformes; Aves | ||
| 219,2016_12_06_10,2016-11-05,H5N8 subtype,Burundi (country),Burundi,Aves | ||
| 240,2015_01_22_1,2014-12-29,H5N1 subtype,United States of America (country),United States of America,Galliformes; Aves | ||
| 241,2016_02_08_3,2016-02-08,H5N2 subtype,South Africa (country),South Africa,Aves | ||
| 268,2008_06_13_2,2008-06-13,H5N1 subtype,North Korea (country),North Korea,Galliformes; Gallus gallus | ||
| 355,2013_11_26_1,2013-11-26,Influenza A virus,Germany (country),Germany,Aves; Homo sapiens | ||
| 371,2015_11_25_1,2015-11-25,H5N6 subtype,People's Republic of China (country),People's Republic of China,Aves | ||
| 376,2014_04_21_2,2014-04-21,Influenza A virus,Japan (country),Japan,Gallus gallus; Aves | ||
| 388,2007_11_30_3,2007-11-04,H5N1 subtype,Myanmar (country),Myanmar,Galliformes; Aves; Gallus gallus | ||
| 421,2009_06_05_1,2009-06-05,H1N1 subtype,United States of America (country),United States of America,Aves; Sus scrofa | ||
| 433,2017_02_01_7,2017-02-01,H5N8 subtype,Czech Republic (country),Czech Republic,Aves | ||
| 442,2016_06_24_2,2016-06-07,H5N6 subtype,People's Republic of China (country),People's Republic of China,Aves | ||
| 443,2011_01_14_6,2011-01-14,H1N1 subtype,United States of America (country),United States of America,Aves; Galliformes; Gallus gallus | ||
| 444,2014_12_23_4,2014-12-13,H5N1 subtype,Quang Ngai (admin level 2); Quảng Ngãi (admin level 1),Vietnam,Aves | ||
| 457,2015_02_23_8,2015-02-02,H9N2 subtype,Egypt (country),Egypt,Galliformes; Homo sapiens | ||
| 485,2017_03_03_4,2017-02-22,H5N8 subtype,South Korea (country),South Korea,Anas; Galliformes | ||
| 505,2017_02_01_6,2017-02-01,H5N1 subtype,Bangladesh (country),Bangladesh,Aves | ||
| 544,2017_08_25_4,2017-08-16,H9N2 subtype,Guangdong (admin level 1),People's Republic of China,Homo sapiens | ||
| 545,2013_04_30_5,2013-04-24,H7N9 subtype,Taiwan (country),Taiwan,Homo sapiens; Galliformes | ||
| 560,2008_04_30_5,2008-04-13,H5N1 subtype,Egypt (country),Egypt,Homo sapiens; Galliformes | ||
| 563,2009_07_10_1,2009-07-10,H1N1 subtype,Canada (country),Canada,Sus scrofa | ||
| 571,2012_03_12_4,2012-02-02,H5N2 subtype,Taiwan (country),Taiwan,Gallus gallus; Aves | ||
| 582,2012_01_06_7,2012-01-06,H5N1 subtype,Zimbabwe (country),Zimbabwe,Homo sapiens | ||
| 650,2011_02_28_4,2011-02-28,H5N1 subtype,Vietnam (country),Vietnam,Galliformes; Aves | ||
| 655,2009_08_03_3,2009-07-24,H1N1 subtype,Australia (country),Australia,Sus scrofa; Galliformes | ||
| 661,2008_10_24_1,2008-10-15,H5N1 subtype,Hong Kong (admin level 1),People's Republic of China,Aves; Galliformes | ||
| 670,2007_11_01_1,2007-11-01,H5N1 subtype,Florida Department (admin level 1),Uruguay,Aves; Homo sapiens | ||
| 677,2014_04_29_4,2014-04-22,H7N9 subtype,"Chekiang Province, Republic of China (admin level 1)",Taiwan,Homo sapiens | ||
| 693,2013_08_19_3,2013-08-19,H7N9 subtype,People's Republic of China (country),People's Republic of China,Homo sapiens; Aves | ||
| 705,2015_10_30_2,2015-10-30,H5N2 subtype,South Korea (country),South Korea,Anas | ||
| 712,2016_05_03_3,2016-05-03,H5N1 subtype,Vietnam (country),Vietnam,Aves | ||
| 759,2015_08_07_4,2015-08-07,Influenza A virus,Mexico (country),Mexico,Aves | ||
| 762,2016_02_22_1,2016-02-01,H5N1 subtype,Bangladesh (country),Bangladesh,Corvus | ||
| 805,2016_10_17_4,2016-10-17,H5N1 subtype,Indonesia (country),Indonesia,Gallus gallus; Sus scrofa; Anas | ||
| 830,2016_10_17_5,2016-10-17,H5N1 subtype,Laos (country),Laos,Aves | ||
| 841,2017_02_01_9,2017-02-01,H5N8 subtype,Italy (country),Italy,Aves | ||
| 857,2008_01_18_1,2008-01-18,H5N1 subtype,Romania (country),Romania,Aves | ||
| 877,2014_12_29_1,2014-12-29,H5N8 subtype,Russia (country),Russia,Gallus gallus; Galliformes; Aves | ||
| 879,2006_12_01_3,2006-12-01,H5N1 subtype,Egypt (country),Egypt,Aves | ||
| 880,2015_08_18_2,2015-08-18,H5N2 subtype,Mexico (country),Mexico,Aves; Galliformes | ||
| 896,2007_09_14_1,2007-09-09,H5N1 subtype,North Dakota (admin level 1),United States of America,Anas | ||
| 968,2013_10_28_6,2013-10-28,H5N1 subtype,Vietnam (country),Vietnam,Gallus gallus; Anas; Galliformes | ||
| 1009,2017_06_27_5,2017-06-23,H5N2 subtype,Taiwan (country),Taiwan,Aves | ||
| 1012,2016_12_01_1,2016-11-12,H5N8 subtype,Croatia (country),Croatia,Galliformes; Gallus gallus | ||
| 1013,2014_04_29_2,2014-04-22,H5N8 subtype,Japan (country),Japan,Gallus gallus; Homo sapiens; Aves | ||
| 1047,2016_01_29_1,2016-01-29,H5N1 subtype,Indonesia (country),Indonesia,Gallus gallus; Anas | ||
| 1093,2015_08_07_2,2015-08-07,H5N1 subtype,Indonesia (country),Indonesia,Aves; Gallus gallus; Anas | ||
| 1095,2014_12_29_6,2014-12-26,H7N9 subtype,Taiwan (country),Taiwan,Aves; Anas | ||
| 1139,2015_07_20_5,2015-07-20,H5N2 subtype,Taiwan (country),Taiwan,Aves | ||
| 1147,2014_12_19_2,2014-12-14,Influenza A virus,South Korea (country),South Korea,Gallus gallus | ||
| 1165,2009_03_17_1,2009-03-15,H5N1 subtype,Neubrandenburg District (admin level 1),East Germany,Aves; Anser; Anas | ||
| 1166,2009_03_17_1,2009-01-11,H5N1 subtype,Germany (country),Germany,Anser; Anas; Passeridae; Columbidae | ||
| 1194,2015_02_06_8,2015-02-06,Influenza A virus,United Kingdom (country),United Kingdom,Aves | ||
| 1210,2012_08_20_4,2012-08-09,H3N2 subtype,United States of America (country),United States of America,Homo sapiens; Sus scrofa | ||
| 1251,2015_01_23_7,2015-01-23,H5N1 subtype,Jenin Governorate (admin level 2); West Bank (admin level 1),State of Palestine,Aves | ||
| 1318,2009_12_14_1,2009-12-03,H1N1 subtype,Kabupaten Karawang (admin level 2); West Java Province (admin level 1),Indonesia,Homo sapiens | ||
| 1327,2008_08_01_1,2008-08-01,H5N1 subtype,South Korea (country),South Korea,Aves | ||
| 1333,2006_12_15_2,2006-12-9,H5N1 subtype,South Korea (country),South Korea,Galliformes; Aves | ||
| 1380,2012_02_02_3,2012-12-30,H5N1 subtype,India (country),India,Galliformes; Aves | ||
| 1382,2015_01_23_5,2015-01-23,H5N8 subtype,Myanmar (country),Myanmar,Aves | ||
| 1407,2017_01_10_2,2017-01-10,H5N8 subtype,Ireland (country),Ireland,Galliformes; Homo sapiens | ||
| 1437,2016_01_22_3,2016-01-22,H5N1 subtype,India (country),India,Gallus gallus; Anas; Aves | ||
| 1471,2015_09_30_5,2015-09-30,H5N1 subtype,Vietnam (country),Vietnam,Aves | ||
| 1476,2014_01_09_3,2013-12-24,H7N7 subtype,South Africa (country),South Africa,Aves; Galliformes | ||
| 1477,2010_06_07_2,2010-06-07,H5N1 subtype,Ukraine (country),Ukraine,Galliformes; Aves | ||
| 1488,2013_02_11_1,2013-02-11,H5N1 subtype,Thailand (country),Thailand,Aves | ||
| 1496,2010_11_18_3,2010-11-01,H5N1 subtype,Hong Kong (admin level 1),People's Republic of China,Homo sapiens | ||
| 1503,2013_04_12_6,2013-04-04,H5N1 subtype,Dong Thap Province (admin level 1),Vietnam,Gallus gallus; Homo sapiens | ||
| 1561,2011_07_11_3,2011-07-11,Influenza A virus,South Africa (country),South Africa,Aves; Homo sapiens | ||
| 1579,2015_06_05_4,2015-06-05,Influenza A virus,Turkey (country),Turkey,Gallus gallus; Aves | ||
| 1610,2009_06_01_1,2009-05-22,H5N1 subtype,Arkhangai Province (admin level 1),Mongolia,Aves | ||
| 1611,2016_02_08_4,2016-02-08,H7N3 subtype,South Africa (country),South Africa,Aves; Anas | ||
| 1620,2013_05_30_2,2013-05-30,H7N1 subtype,Catalonia (admin level 1),Spain,Galliformes | ||
| 1623,2017_08_25_3,2017-08-22,H5N8 subtype,South Africa (country),South Africa,Aves; Gallus gallus | ||
| 1634,2015_05_15_1,2015-05-15,H7N3 subtype,Chiapas (admin level 1),Mexico,Turdidae | ||
| 1650,2017_02_07_7,2017-01-31,H5N1 subtype,Cambodia (country),Cambodia,Gallus gallus | ||
| 1708,2014_03_20_2,2014-03-20,H5N1 subtype,People's Republic of China (country),People's Republic of China,Galliformes; Aves | ||
| 1722,2010_01_20_6,2010-01-15,H3N2 subtype,Iowa (admin level 1),United States of America,Homo sapiens | ||
| 1727,2016_12_29_1,2016-11-23,H5N8 subtype,South Korea (country),South Korea,Aves; Chroicocephalus ridibundus; Anas | ||
| 1744,2014_01_09_1,2013-12-24,H5N2 subtype,People's Republic of China (country),People's Republic of China,Gallus gallus; Galliformes | ||
| 1762,2011_06_20_3,2011-06-04,Influenza A virus,Germany (country),Germany,Aves | ||
| 1814,2006_12_07_3,2006-12-07,H5N1 subtype,Quebec (admin level 1),Canada,Homo sapiens | ||
| 1827,2014_12_09_2,2014-12-09,H5N8 subtype,Netherlands (country),Netherlands,Galliformes; Anas; Aves | ||
| 1832,2014_04_29_1,2014-04-22,H5N1 subtype,North Korea (country),North Korea,Aves | ||
| 1840,2017_02_07_9,2017-01-26,H5N5 subtype,Germany (country),Germany,Galliformes | ||
| 1841,2011_06_20_2,2011-06-16,H5N1 subtype,Apriltsi Municipality (admin level 2); Lovech Province (admin level 1),Bulgaria,Galliformes; Homo sapiens | ||
| 1908,2015_04_03_6,2015-03-27,Influenza A virus,Netherlands (country),Netherlands,Aves | ||
| 1935,2010_01_12_1,2009-12-29,H5N1 subtype,Hong Kong (admin level 1),People's Republic of China,Copsychus saularis; Aves; Homo sapiens | ||
| 1964,2016_12_29_12,2016-12-15,Influenza A virus,Jerusalem District (admin level 1),Israel,Gallus gallus | ||
| 1972,2015_01_23_8,2015-01-23,H5N3 subtype,Taiwan (country),Taiwan,Aves; Galliformes | ||
| 1994,2016_05_06_4,2016-05-06,H5N8 subtype,Taiwan (country),Taiwan,Aves; Gallus gallus | ||
| 1995,2015_03_20_5,2015-03-20,H7N7 subtype,Netherlands (country),Netherlands,Gallus gallus; Galliformes; Anser | ||
| 1997,2016_07_29_1,2016-07-29,H5N8 subtype,United States of America (country),United States of America,Aves; Galliformes; Anas | ||
| 2004,2009_02_06_7,2009-02-06,H5N2 subtype,British Columbia (admin level 1),Canada,Galliformes | ||
| 2038,2012_04_12_3,2012-03-29,H5N2 subtype,Ireland (country),Ireland,Aves | ||
| 2056,2007_09_28_3,2007-09-28,H5N1 subtype,Bangladesh (country),Bangladesh,Galliformes; Gallus gallus | ||
| 2057,2015_10_28_2,2015-10-28,Influenza A virus,Gaza Strip (admin level 1),State of Palestine,Aves | ||
| 2064,2016_12_13_11,2016-11-24,Influenza A virus,Tunisia (country),Tunisia,Aves | ||
| 2065,2010_12_03_6,2010-11-10,H5N2 subtype,Germany (country),Germany,Aves; Homo sapiens | ||
| 2081,2015_03_06_4,2015-03-06,H5N2 subtype,South Africa (country),South Africa,Aves | ||
| 2096,2017_06_06_7,2017-05-17,H5N8 subtype,Zimbabwe (country),Zimbabwe,Aves | ||
| 2097,2009_01_30_1,2009-01-30,H5N1 subtype,Phitsanulok (admin level 1),Thailand,Aves | ||
| 2109,2017_05_12_4,2017-04-04,H7N3 subtype,Mexico (country),Mexico,Aves | ||
| 2128,2015_01_30_1,2015-01-30,H5N1 subtype,Kuban-Black Sea Oblast (admin level 2); Russian Soviet Federative Socialist Republic (admin level 1),Soviet Union,Pelecanus crispus; Aves | ||
| 2160,2014_01_22_5,2014-01-22,Influenza A virus,Can Tho (admin level 1),Vietnam,Galliformes; Homo sapiens | ||
| 2169,2016_05_20_4,2016-05-20,H7N7 subtype,Italy (country),Italy,Aves | ||
| 2184,2016_07_12_4,2016-07-12,H5N6 subtype,Vietnam (country),Vietnam,Aves | ||
| 2188,2017_03_08_14,2017-03-08,H5N2 subtype,United States of America (country),United States of America,Aves | ||
| 2199,2016_01_08_2,2016-01-08,H5N1 subtype,France (country),France,Galliformes; Aves | ||
| 2205,2015_08_24_1,2015-08-24,H5N6 subtype,People's Republic of China (country),People's Republic of China,Aves | ||
| 2231,2017_01_23_6,2017-01-23,Influenza A virus,North Korea (country),North Korea,Aves; Homo sapiens | ||
| 2253,2016_12_13_14,2016-12-13,H5N8 subtype,Iran (country),Iran,Aves; Galliformes | ||
| 2254,2015_03_20_2,2015-03-20,H5N8 subtype,Sweden (country),Sweden,Galliformes | ||
| 2270,2008_11_07_2,2008-11-07,H5N1 subtype,Tombali Region (admin level 1),Guinea-Bissau,Gallus gallus | ||
| 2278,2017_03_22_14,2017-03-22,H5N6 subtype,Vietnam (country),Vietnam,Gallus gallus | ||
| 2287,2017_09_28_1,2017-08-25,H5N8 subtype,Canton of Fribourg (admin level 1),Switzerland,Aves; Homo sapiens | ||
| 2288,2015_01_30_5,2015-01-30,H7N9 subtype,Canada (country),Canada,Homo sapiens; Gallus gallus | ||
| 2299,2007_04_16_2,2007-04-16,H5N1 subtype,Iran (country),Iran,Gallus gallus; Aves | ||
| 2300,2017_03_22_8,2017-03-22,H5N6 subtype,South Korea (country),South Korea,Aves | ||
| 2307,2016_03_21_4,2016-03-21,H5N1 subtype,Burkina Faso (country),Burkina Faso,Aves | ||
| 2347,2009_01_14_4,2008-12-26,H5N1 subtype,Jiangsu Province (Republic of China) (admin level 1),Republic of China (1912–1949),Galliformes; Gallus gallus | ||
| 2348,2009_01_14_4,2008-12-26,H5N1 subtype,Taiwan (country),Taiwan,Gallus gallus; Aves | ||
| 2399,2014_11_03_4,2014-10-24,H5N1 subtype,Lhasa (admin level 2); Tibet (admin level 1),People's Republic of China,Gallus gallus; Anas | ||
| 2435,2015_04_03_3,2015-04-02,H5N1 subtype,United States of America (country),United States of America,Aves; Galliformes | ||
| 2463,2007_04_16_1,2007-04-16,H5N1 subtype,Japan (country),Japan,Aves; Aves | ||
| 2479,2009_03_02_6,2009-03-02,H5N1 subtype,Phongsaly Province (admin level 1),Laos,Galliformes; Homo sapiens | ||
| 2480,2011_08_29_1,2011-08-19,H5N1 subtype,Cambodia (country),Cambodia,Homo sapiens; Galliformes | ||
| 2492,2017_03_08_5,2017-02-28,H5N8 subtype,United States of America (country),United States of America,Anas; Phasianidae | ||
| 2499,2017_03_08_12,2017-03-08,Influenza A virus,arrondissement of Montélimar (admin level 2); Drôme (admin level 1),France,Aves; Homo sapiens | ||
| 2507,2016_07_12_2,2016-07-04,H5N2 subtype,Canada (country),Canada,Aves |
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