Fixed return type. #482
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| name: Run PyTests | |
| on: | |
| push: | |
| pull_request: | |
| branches: ["master"] | |
| env: | |
| PY_COLORS: 1 | |
| jobs: | |
| build: | |
| name: Python ${{ matrix.python-version }} ${{ matrix.os }} ${{ matrix.mpi }} | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| # os: [ "ubuntu-18.04", "macos-11" ] | |
| os: [ "ubuntu-22.04"] | |
| python-version: ["3.9", "3.10" ] | |
| mpi: [mpich, openmpi] | |
| include: | |
| - os: ubuntu-22.04 | |
| mpi: mpich | |
| install-mpi: sudo apt install -y mpich libmpich-dev tree | |
| - os: ubuntu-22.04 | |
| mpi: openmpi | |
| install-mpi: sudo apt install -y openmpi-bin libopenmpi-dev tree | |
| # - os: macos-11 | |
| # mpi: mpich | |
| # install-mpi: brew install mpich tree | |
| # - os: macos-11 | |
| # mpi: openmpi | |
| # install-mpi: brew install open-mpi tree | |
| steps: | |
| - name: Checkout 🛎️ | |
| uses: "actions/checkout@v4" | |
| - name: Install MPI 📥 | |
| run: | | |
| ${{ matrix.install-mpi }} | |
| mpirun --version | |
| which mpirun | |
| which tree | |
| - name: Set up Python ${{ matrix.python-version }} 🐍 | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: System Info 💻 | |
| run: | | |
| python -c "from multiprocessing import cpu_count ; print('cpu_count={}'.format(cpu_count()))" | |
| if [ "$RUNNER_OS" == "macOS" ]; then | |
| echo "***************************" | |
| system_profiler SPHardwareDataType | |
| echo "***************************" | |
| elif [ "$RUNNER_OS" == "Linux" ]; then | |
| echo "***************************" | |
| lscpu | egrep 'Model name|Socket|Thread|NUMA|CPU\(s\)' | |
| lshw -short -C memory | |
| echo "***************************" | |
| fi | |
| python3 --version | |
| python --version | |
| - name: Install Python Dependencies 📥 | |
| run: | | |
| python3 -m pip install --upgrade pip wheel | |
| python3 -m pip install --upgrade -r requirements.txt | |
| - name: Test with pytest 🚀 | |
| run: | | |
| python3 setup.py install | |
| git clone https://github.com/djgroen/FabFlee.git | |
| # The two lines here are needed to run Action with OpenMPI. I don't know why (!!) | |
| python3 -m pip install --upgrade pip wheel | |
| python3 -m pip install --upgrade -r requirements.txt | |
| export TMPDIR=/tmp | |
| export OMPI_MCA_btl=self,tcp | |
| export OMPI_MCA_btl_vader_backing_directory=/tmp | |
| export FLEE_TYPE_CHECK=true | |
| export PYTHONPATH=/home/runner/work/flee/flee:$PYTHONPATH | |
| cd FabFlee/config_files/mali2012 | |
| mpiexec -n 2 python3 /home/runner/work/flee/flee/runscripts/run_par.py input_csv source_data 50 simsetting.yml | |
| mpirun -n 2 python3 /home/runner/work/flee/flee/runscripts/run_par.py input_csv source_data 50 simsetting.yml | |
| cd ../../.. | |
| echo "PYTHONPATH = $PYTHONPATH" | |
| python3 -m pytest --log-cli-level=DEBUG tests/ | |
| python3 -m pytest --log-cli-level=DEBUG tests_mpi/ | |