testing github actions

.github/workflows/python-package.yml

@@ -0,0 +1,41 @@
+# This workflow will install Python dependencies, run tests and lint with a
+# variety of Python versions For more information see:
+# https://docs.github.com/en/actions/automating-builds-and-tests/building-and-testing-python
+
+name: Python package
+
+on:
+  push:
+    branches: [ "main" ]
+  pull_request:
+    branches: [ "main" ]
+
+jobs:
+  build:
+
+    runs-on: ubuntu-latest
+    strategy:
+      fail-fast: false
+      matrix:
+        python-version: ["3.9", "3.10", "3.11"]
+
+    steps:
+    - uses: actions/checkout@v4
+    - name: Set up Python ${{ matrix.python-version }}
+      uses: actions/setup-python@v3
+      with:
+        python-version: ${{ matrix.python-version }}
+    - name: Install dependencies
+      run: |
+        python -m pip install --upgrade pip
+        python -m pip install flake8 pytest
+        if [ -f requirements.txt ]; then pip install -r requirements.txt; fi
+    - name: Lint with flake8
+      run: |
+        # stop the build if there are Python syntax errors or undefined names
+        flake8 . --count --select=E9,F63,F7,F82 --show-source --statistics
+        # exit-zero treats all errors as warnings. The GitHub editor is 127 chars wide
+        flake8 . --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics
+    - name: Test with pytest
+      run: |
+        pytest

.github/workflows/python-publish.yml

@@ -0,0 +1,40 @@
+# This workflow will upload a Python Package using Twine when a release is
+# created For more information see:
+# https://docs.github.com/en/actions/automating-builds-and-tests/building-and-testing-python#publishing-to-package-registries
+
+# This workflow uses actions that are not certified by GitHub.
+# They are provided by a third-party and are governed by
+# separate terms of service, privacy policy, and support
+# documentation.
+
+name: Upload Python Package
+
+on:
+  release:
+    types: [published]
+
+permissions:
+  contents: read
+
+jobs:
+  deploy:
+
+    runs-on: ubuntu-latest
+
+    steps:
+    - uses: actions/checkout@v4
+    - name: Set up Python
+      uses: actions/setup-python@v3
+      with:
+        python-version: '3.x'
+    - name: Install dependencies
+      run: |
+        python -m pip install --upgrade pip
+        pip install build
+    - name: Build package
+      run: python -m build
+    - name: Publish package
+      uses: pypa/gh-action-pypi-publish@27b31702a0e7fc50959f5ad993c78deac1bdfc29
+      with:
+        user: __token__
+        password: ${{ secrets.PYPI_API_TOKEN }}

ewdm/sources.py

@@ -15,18 +15,18 @@
 
 
 class SpotterBuoysDataSource(object):
-    """Class to handle Spotter buoy data from SDCard"""
+    """Class to handle Spotter buoy data from SD Card"""
 
     def __init__(
             self,
-            fname: str ="displacement.csv",
+            fname: str ="displacements.csv",
         ):
         if os.path.isfile(fname):
             self.fname = Path(fname)
         else:
             raise FileNotFoundError(
-                "File not found. The name of the file in the SDCard is "
-                "likely `displacement.csv`. Please provide "
+                "File not found. The name of the file in the SD Card is "
+                "likely `displacements.csv`. Please provide "
                 "the full path to this file."
             )
 
@@ -55,7 +55,7 @@ def read_dataset(self):
         # load data
         data = pd.read_csv(
             self.fname, names=columns, header=None, skiprows=1,
-            parse_dates={"time": columns[:7]}, date_parser=parser
+            parse_dates={"time": columns[:7]}, date_format=parser
         )
 
         # convert to xarray and add metadata

requirements.txt

@@ -0,0 +1,9 @@
+ numpy
+ scipy
+ pandas
+ xarray
+ matplotlib
+ bottleneck
+ pydap
+ netCDF4
+ tqdm

setup.py

@@ -9,7 +9,7 @@
 
 setup(
     name="ewdm",
-    version="0.1",
+    version="0.2",
     author="Daniel Peláez-Zapata",
     author_email="[email protected]",
     description="EWDM: A package for a wavelet-based directional wave spectra",
@@ -20,6 +20,7 @@
     install_requires=[
         "numpy",
         "scipy",
+        "pandas",
         "xarray",
         "matplotlib",
         "bottleneck",